Literature DB >> 31319181

Exploring individual and group differences in latent brain networks using cross-validated simultaneous component analysis.

Nathaniel E Helwig1, Matthew A Snodgress2.   

Abstract

Component models such as PCA and ICA are often used to reduce neuroimaging data into a smaller number of components, which are thought to reflect latent brain networks. When data from multiple subjects are available, the components are typically estimated simultaneously (i.e., for all subjects combined) using either tensor ICA or group ICA. As we demonstrate in this paper, neither of these approaches is ideal if one hopes to find latent brain networks that cross-validate to new samples of data. Specifically, we note that the tensor ICA model is too rigid to capture real-world heterogeneity in the component time courses, whereas the group ICA approach is too flexible to uniquely identify latent brain networks. For multi-subject component analysis, we recommend comparing a hierarchy of simultaneous component analysis (SCA) models. Our proposed model hierarchy includes a flexible variant of the SCA framework (the Parafac2 model), which is able to both (i) model heterogeneity in the component time courses, and (ii) uniquely identify latent brain networks. Furthermore, we propose cross-validation methods to tune the relevant model parameters, which reduces the potential of over-fitting the observed data. Using simulated and real data examples, we demonstrate the benefits of the proposed approach for finding credible components that reveal interpretable individual and group differences in latent brain networks.
Copyright © 2019 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Group component analysis; Multi-subject analysis; Multiway analysis; Parafac2; Parallel factor analysis; Tensor decomposition

Year:  2019        PMID: 31319181      PMCID: PMC6765442          DOI: 10.1016/j.neuroimage.2019.116019

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  46 in total

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2.  Parallel Factor Analysis as an exploratory tool for wavelet transformed event-related EEG.

Authors:  Morten Mørup; Lars Kai Hansen; Christoph S Herrmann; Josef Parnas; Sidse M Arnfred
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3.  Mixtures of probabilistic principal component analyzers.

Authors:  M E Tipping; C M Bishop
Journal:  Neural Comput       Date:  1999-02-15       Impact factor: 2.026

4.  Analysis of fMRI data by blind separation into independent spatial components.

Authors:  M J McKeown; S Makeig; G G Brown; T P Jung; S S Kindermann; A J Bell; T J Sejnowski
Journal:  Hum Brain Mapp       Date:  1998       Impact factor: 5.038

5.  An information-maximization approach to blind separation and blind deconvolution.

Authors:  A J Bell; T J Sejnowski
Journal:  Neural Comput       Date:  1995-11       Impact factor: 2.026

6.  Event related potentials during object recognition tasks.

Authors:  X L Zhang; H Begleiter; B Porjesz; W Wang; A Litke
Journal:  Brain Res Bull       Date:  1995       Impact factor: 4.077

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Authors:  J G Snodgrass; M Vanderwart
Journal:  J Exp Psychol Hum Learn       Date:  1980-03

8.  Degeneracy in Candecomp/Parafac and Indscal Explained For Several Three-Sliced Arrays With A Two-Valued Typical Rank.

Authors:  Alwin Stegeman
Journal:  Psychometrika       Date:  2007-07-28       Impact factor: 2.500

9.  Hand classification of fMRI ICA noise components.

Authors:  Ludovica Griffanti; Gwenaëlle Douaud; Janine Bijsterbosch; Stefania Evangelisti; Fidel Alfaro-Almagro; Matthew F Glasser; Eugene P Duff; Sean Fitzgibbon; Robert Westphal; Davide Carone; Christian F Beckmann; Stephen M Smith
Journal:  Neuroimage       Date:  2016-12-16       Impact factor: 6.556

10.  A positive-negative mode of population covariation links brain connectivity, demographics and behavior.

Authors:  Stephen M Smith; Thomas E Nichols; Diego Vidaurre; Anderson M Winkler; Timothy E J Behrens; Matthew F Glasser; Kamil Ugurbil; Deanna M Barch; David C Van Essen; Karla L Miller
Journal:  Nat Neurosci       Date:  2015-09-28       Impact factor: 24.884

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  2 in total

1.  Multi-Subject Analysis for Brain Developmental Patterns Discovery via Tensor Decomposition of MEG Data.

Authors:  Irina Belyaeva; Ben Gabrielson; Yu-Ping Wang; Tony W Wilson; Vince D Calhoun; Julia M Stephen; Tülay Adali
Journal:  Neuroinformatics       Date:  2022-08-24

2.  Tracing Evolving Networks Using Tensor Factorizations vs. ICA-Based Approaches.

Authors:  Evrim Acar; Marie Roald; Khondoker M Hossain; Vince D Calhoun; Tülay Adali
Journal:  Front Neurosci       Date:  2022-04-25       Impact factor: 5.152

  2 in total

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