Literature DB >> 31310822

A fast machine learning approach to facilitate the detection of interictal epileptiform discharges in the scalp electroencephalogram.

Elham Bagheri1, Jing Jin2, Justin Dauwels3, Sydney Cash4, M Brandon Westover4.   

Abstract

BACKGROUND: Finding interictal epileptiform discharges (IEDs) in the EEG is a part of diagnosing epilepsy. Automated software for annotating EEGs of patients with suspected epilepsy can therefore help with reaching a diagnosis. A large amount of data is required for training and evaluating an effective IED detection system. IEDs occur infrequently in the most patients' EEG, therefore, interictal EEG recordings contain mostly background waveforms. NEW <br> METHOD: As the first step to detect IEDs, we propose a machine learning technique eliminating most EEG background data using an ensemble of simple fast classifiers based on several EEG features. This could save computation time for an IED detection method, allowing the remaining waveforms to be classified by more computationally intensive methods. We consider several efficient features and reject background by applying thresholds on them in consecutive steps. <br> RESULTS: We applied the proposed algorithm on a dataset of 156 EEGs (93 and 63 with and without IEDs, respectively). We were able to eliminate 78% of background waveforms while retaining 97% of IEDs on our cross-validated dataset. COMPARISON WITH EXISTING <br> METHODS: We applied support vector machine, k-nearest neighbours, and random forest classifiers to detect IEDs with and without initial background rejection. Results show that rejecting background by our proposed method speeds up the overall classification by a factor ranging from 1.8 to 4.7 for the considered classifiers. <br> CONCLUSIONS: The proposed method successfully reduces computation time of an IED detection system. Therefore, it is beneficial in speeding up IED detection especially when utilizing large EEG datasets.
Copyright © 2019 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  EEG; Ensemble classifier; Epilepsy diagnosis; Fast spike detection; Interictal epileptiform discharges; Machine learning

Year:  2019        PMID: 31310822      PMCID: PMC6993930          DOI: 10.1016/j.jneumeth.2019.108362

Source DB:  PubMed          Journal:  J Neurosci Methods        ISSN: 0165-0270            Impact factor:   2.390


  33 in total

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Journal:  Epilepsy Behav       Date:  2013-01-03       Impact factor: 2.937

5.  Interictal epileptiform discharge characteristics underlying expert interrater agreement.

Authors:  Elham Bagheri; Justin Dauwels; Brian C Dean; Chad G Waters; M Brandon Westover; Jonathan J Halford
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Journal:  Neurology       Date:  2013-04-17       Impact factor: 9.910

8.  Rapid annotation of interictal epileptiform discharges via template matching under Dynamic Time Warping.

Authors:  J Jing; J Dauwels; T Rakthanmanon; E Keogh; S S Cash; M B Westover
Journal:  J Neurosci Methods       Date:  2016-03-02       Impact factor: 2.390

9.  Standardized database development for EEG epileptiform transient detection: EEGnet scoring system and machine learning analysis.

Authors:  Jonathan J Halford; Robert J Schalkoff; Jing Zhou; Selim R Benbadis; William O Tatum; Robert P Turner; Saurabh R Sinha; Nathan B Fountain; Amir Arain; Paul B Pritchard; Ekrem Kutluay; Gabriel Martz; Jonathan C Edwards; Chad Waters; Brian C Dean
Journal:  J Neurosci Methods       Date:  2012-11-19       Impact factor: 2.390

10.  Spike detection. I. Correlation and reliability of human experts.

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Review 2.  Applications and Techniques for Fast Machine Learning in Science.

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  2 in total

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