| Literature DB >> 31303843 |
Gamal H Osman1,2, Raya Soltane3,4, Ibrahim Saleh5, Hussein H Abulreesh1, Khaled S Gazi6, Ibrahim A Arif5, Ahmed M Ramadan7,8, Hussien F Alameldin9,10, Yehia A Osman11, Mamdouh Idriss12.
Abstract
Black cutworm (BCW) is an economically important lepidopteran insect. The control of this insect by a Bt toxin and the understanding of the interaction between the Bt toxin and its receptor molecule were the objectives of this research work. A gene coding for a Vip3A receptor molecule was identified, characterized, and cloned, from the brush border membrane vesicles (BBMV) of the BCW. The nucleotide sequence analysis of the cloned putative Vip3A-receptor gene revealed that the gene was 1.3-kb long and exhibited no homology with any gene in the gene bank. We succeeded in identifying and characterizing most of the Vip3A-receptor gene sequence; and the nucleotide sequence analysis of the cloned putative Vip3A-receptor gene (accession no. KX858809) revealed about 92% of the expected sequence was recovered, which exhibited no homology with any gene in the GenBank.Entities:
Keywords: BBMV; Bacillus thuringiensis; Receptor; Vip3A
Year: 2018 PMID: 31303843 PMCID: PMC6601361 DOI: 10.1016/j.sjbs.2018.06.002
Source DB: PubMed Journal: Saudi J Biol Sci ISSN: 1319-562X Impact factor: 4.219
Fig. 1Immuno-precipitation of the Vip3Aa toxin binding protein. The Vipp3Aa binding protein was precipitated by adding anti Vip3Aa serum to Sepharose protein-A. Vip3Aa was added followed by the incubation with the solubilized BCW BBMV proteins. The bound proteins were separated by 10% SDS-PAGE, as shown in lane 2, while lane 1 contains high molecular weight protein marker.
Fig. 2Ethidium Bromide stained agarose gel resolving the 1.37 Kbp PCR fragment of Vip3 Aa-R gene from BCW cDNA. Lane 1: Step DNA Marker and lane 2: The amplified PCR fragment.
Fig. 3CLC ORF restriction map for the obtained BCW-Vip3Aa-R sequence (accession No. KX858809). This sequence was characterized as ORF from nt (1) to nt (1182) and the presence of EcoRV site (at 345-863 nt) and SalI (at 470 nt).
Fig. 4NCBI ORF Finder for the obtained BCW-Vip3Aa-R sequence (accession No. KX858809). This sequence was characterized as ORF 1 from nt (1) to nt (1182).
Fig. 5The SMART diagram predicted domains, repeats, motifs and features of BCW-Vip3Aa-R protein.
Accession numbers, description and the calculated e-value of homologous proteins to Agrotis ipsilon BCW-Vip3Aa-R amino acids sequence (accession No. KX858809) identified using BLASTx search.
| Description | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|
| Spod-11-tox b protein [Spodoptera frugiperda] | 1026 | 98% | 2e−42 | 40% | AFC87713.1 |
| immune related protein [Spodoptera frugiperda] | 1025 | 98% | 2e−42 | 40% | AAZ94260.1 |
| x-tox [Spodoptera exigua] | 645 | 98% | 3e−41 | 39% | AKJ54496.1 |
| Heli-5-tox protein [Helicoverpa armigera] | 501 | 98% | 9e−40 | 41% | AFC87714.1 |
| PREDICTED: tenascin-like isoform X2 [Papilio xuthus] | 929 | 98% | 9e−32 | 31% | XP_013161775.1 |
| PREDICTED: tenascin-like isoform X3 [Papilio xuthus] | 884 | 98% | 2e−16 | 33% | XP_013161776.1 |
| Heli-7-tox protein [Helicoverpa armigera] | 609 | 98% | 8e−29 | 38% | AFC87715.1 |
| PREDICTED: tenascin-like isoform X4 [Papilio xuthus] | 841 | 98% | 2e−28 | 34% | XP_013161778.1 |
| antibacterial protein [Heliothis virescens] | 662 | 98% | 6e−28 | 42% | ACI02333.1 |
| PREDICTED: tenascin-like isoform X1 [Papilio xuthus] | 948 | 98% | 1e−27 | 34% | XP_013161774.1 |
| immune-related protein 5Tox [Bombyx mori] |
Accession numbers, description and the calculated e-value of homologous 47 amino acid of RPT1 domain in Agrotis ipsilon BCW-Vip3Aa-R identified using BLASTp search.
| Description | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|
| x-tox [Spodoptera exigua] | 212 | 95% | 0.011 | 42% | AKJ54496.1 |
| Heli-7-tox protein [Helicoverpa armigera] | 109 | 93% | 0.052 | 44% | AFC87715.1 |
| Spod-11-tox b protein [Spodoptera frugiperda] | 249 | 100% | 0.071 | 44% | AFC87713.1 |
| immune related protein [Spodoptera frugiperda] | 248 | 100% | 0.072 | 44% | AAZ94260.1 |
| antibacterial protein [Heliothis virescens] | 104 | 91% | 0.45 | 53% | ACI02333.1 |
| Heli-5-tox protein [Helicoverpa armigera] | 71.6 | 87% | 0.67 | 53% | AFC87714.1 |
| 6tox [Galleria mellonella] | 35.0 | 91% | 1.3 | 40% | AAN15783.1 |
| immune-related protein 5Tox [Bombyx mori] | 67.4 | 89% | 2.9 | 33% | AAZ94261.1 |
| possible antimicrobial peptide [Bombyx mori] | 33.1 | 87% | 5.5 | 34% | BAE53370.1 |
| antimicrobial protein 6Tox precursor [Bombyx mori] | 66.2 | 89% | 5.7 | 33% | NP_001037004.1 |