| Literature DB >> 31303842 |
Abdallah M Elgorban1,2,3, Ali H Bahkali1, Dunia A Al Farraj1, Mohamed A Abdel-Wahab1.
Abstract
This study is to evaluate the potential of endophytic fungi of Salvadora persica for the production of bioactive compounds against pathogenic bacteria and fungi. Forty-two fungal isolates were obtained from 135 young and old stem and 125 root segments. Those 42 isolates representing ten fungi include: Trichoderma sp. (the most common), two species of Alternaria, Rhizopus arrhizus and 6 sterile mycelia. The ten fungi were grown in liquid culture and their crude extracts were tested against pathogenic bacteria and fungi. Nine crude extracts gave positive reactions against pathogenic bacteria of which Alternaria sp. (A8) was chosen further study. The fungal isolate was growing as sterile mycelium and was identified by phylogenetic analyses based on LSU rDNA sequence data and it might represent undescribed species of Alternaria. Sixty-two bioactive chemical compounds were identified from the ethyl acetate crude extracts of Alternaria sp., of which the following were recorded as major compounds in the active sub-fractions. These compounds showed strong antibacterial activity in combination.Entities:
Keywords: Antibacterial; Arabian Peninsula; Molecular phylogeny; Pleosporaceae
Year: 2018 PMID: 31303842 PMCID: PMC6601026 DOI: 10.1016/j.sjbs.2018.04.010
Source DB: PubMed Journal: Saudi J Biol Sci ISSN: 1319-562X Impact factor: 4.219
Fig. 1Salvadora persica at Okair Geological Reserve (26°29′9″N, 48°24′54″E) located 160 km west of Dammam city, Saudi Arabia.
Fig. 3Phylogenetic relationship of Rhizopus arrhizus (A9) along with phylogenetically related fungi in the genus Rhizopus based on the nucleotide sequences of LSU rDNA. The maximum likelihood tree (ML) was constructed in MEGA7 (Tamura et al., 2013). Bootstrap support on the nodes represent ML and MP ≥ 50% respectively. The tree is rooted to Rhizomucor miehei. Newly generated sequence in the present study is in blue.
Fig. 4Phylogenetic relationship of Aspergillus sp. (A3) along with phylogenetically related fungi in the genus Aspergillus based on the nucleotide sequences of LSU rDNA. The maximum likelihood tree (ML) was constructed in MEGA7 (Tamura et al., 2013). Bootstrap support on the nodes represent ML and MP ≥ 50% respectively. The tree is rooted to Penicillium steckii. Newly generated sequence in the present study is in blue.
Endophytic fungi isolated from 135 stem segments and 125 root segments Salvadora
| Fungi | Organ | N | % |
|---|---|---|---|
| stem | |||
| stem | |||
| root | |||
| # | stem | ||
| stem | |||
| Sterile mycelium (A2) | stem | ||
| Sterile mycelium (A5) | stem | ||
| Sterile mycelium (A6) | stem | ||
| Sterile mycelium (A7) | stem | ||
| Sterile mycelium (A10) | root |
N number of isolates. % Frequency of occurrence. # Supported by molecular data.
Bioassay results of endophytic fungi of S. persica (the numbers are the clear zones in centimeter).
| Fungi | ||||
|---|---|---|---|---|
| 0.9 | 0.9 | Negative | Negative | |
| 1.3 | 1.2 | Negative | Negative | |
| 1.7 | 2.3 | Negative | Negative | |
| 0.8 | 1.1 | Negative | Negative | |
| # | 0.9 | 1.1 | Negative | Negative |
| Sterile mycelium (A2) | 1.1 | Negative | Negative | Negative |
| Sterile mycelium (A5) | 0.9 | Negative | Negative | Negative |
| Sterile mycelium (A6) | 1 | Negative | Negative | Negative |
| Sterile mycelium (A7) | Negative | Negative | Negative | Negative |
| Sterile mycelium (A10) | 1.1 | 1.1 | Negative | Negative |
Major natural products compounds identified in the ethyl acetate extract from the culture filtrate of Alternaria sp. (A8) by GC-MS:
| Peak no. | R-Time | Name of the compound | Molecular formula | Molecular weight | Area % | Activity |
|---|---|---|---|---|---|---|
| 40 | 40.92 | 1,2-Benzenedicarboxylic acid, bis (2- ethyhexyl) ester | C24H38O4 | 390 | 51.15 | Antimicrobial |
| 10 | 20.42 | 6,8-Dimethoxy-4-methyl-4H-chromene | 10.87 | |||
| 20 | 29.101 | 2,5-Cyclohexadien-1-one, 2,6-bis (1,1-dimethylethyl)-4-ethylidene- | C16H24 | 232 | 3.94 | |
| 11 | 21.893 | Cetene | C16H32 | 224.43 | 3.32 | Antioxidants |
| 22 | 29.817 | 1,2-Benzenedicarboxylic acid, dibutyl ester (CAS) Butyl phthalate | C16H22O4 | 278 | 3.23 | Antimicrobial, antioxidant, plasticizer, cosmetics |
| 16 | 26.242 | 1-Octadecene | C18H36 | 252.48 | 2.64 | Anticancer, antioxidant and antimicrobial activities |
| 4 | 9.87 | Benzeneethanol | C8H10O | 122.16 | 2.47 | |
| 27 | 31.971 | 1-Octdecene | C18H36 | 252.48 | 2.21 | |
| 23 | 30.201 | Cycloeicosane | C20 H40 | 280.54 | 1.96 | |
| 2 | 4.03 | 1-Butanol, 3-methyl-acetate | C7H14O2 | 130.18 | 1.91 | |
| 8 | 16.991 | 1-Tetradecene | C14H28 | 196.37 | 1.77 | Antimicrobial |
| 5 | 11.559 | Naphthalene | C10 H8 | 128.17 | 1.69 | Insecticidal |
| 13 | 24.001 | Phenol, 2,4-di-t-butyl-6-nitro | C14H21 NO3 | 251.32 | 1.59 | Antimicrobial, anticancer |
Major bioactive compounds identified from ethyl acetate crude of Alternaria sp. (isolate No. A8), sub-fraction (A8-1-5):
| Bioactive compound | RT (min) | Peak area% | MW | Chemical structure | Pharmacological actions |
|---|---|---|---|---|---|
| Phenol, 2,4-bis(1,1-dimethylethyl)- | 18.00 | 26.92 | 206 | Antibacterial and moderate cytotoxic ( | |
| 7-Methyl-Z-tetradecen-1-ol acetate | 25.62 | 12.53 | 268 | ||
| 1-Hexadecanol, 2-methyl- | 27.07 | 11.43 | 256 | Antimicrobial, antioxidant ( | |
| Azulene,1,4-dimethyl-7-(1-methylethyl) | 24.05 | 10.76 | 198 | Antibacterial | |
| 7,9-Di-tert-butyl-1-oxaspiro (4,5) deca-6,9-Diene-2,8-dione (Ketone) | 26.19 | 8.37 | 276 | Antioxidant | |
| Z-(13,14-Epoxy)tetradec-11-en-1-ol acetate | 23.19 | 7.45 | 268 | ||
| 1-Heptatriacotanol | 16.3 | 5.99 | 536 | Antioxidant, anticancer, anti- inflammatory ( | |
| Propanoic acid, ethyl ester | 3.73 | 5.15 | 102 | Unkown | |
| 9,10-Secocholesta-5,7,10(19)-Triene-1,3-diol, 25-[(trimethylsilyl)oxy]-, (3á,5Z,7E)- (Calcitriol) | 12.3 | 1.94 | 488 | Anticancer, regulate calcium in human blood |
Major bioactive compounds identified from ethyl acetate crude of Alternaria sp. (isolate No. A8), sub-fraction (A8-1-6):
| Bioactive compound | RT (min) | Peak area% | MW | Chemical structure | Pharmacological actions |
|---|---|---|---|---|---|
| Dasycarpidan-1-methanol, acetate (ester) | 24.73 | 30.33 | 326 | Antimicrobial ( | |
| Cholest-22-ene-21-ol, 3,5-dehydro-6-methoxy-, pivalate | 25.41 | 22.14 | 498 | New compound | |
| E-8-Methyl-9-tetradecen-1-ol acetate | 26.19 | 15.49 | 268 | Insect pheromone ( | |
| 9,10-Secocholesta-5,7,10(19)-triene-1,3-diol, 25-[(trimethylsilyl)oxy]-, (3á,5Z,7E)- (Calcitriol) | 12.8 | 8.32 | 488 | Anticancer, regulate calcium in human blood | |
| 17-Pentatriacontene | 23.98 | 6.71 | 490 | Antimicrobial | |
| 1-Heptatriacotanol | 16.65 | 6.34 | 536 | Antioxidant, anticancer and anti-inflammatory | |
| Oleic acid, 3-(octadecyloxy)propyl Ester | 30.95 | 5.82 | 592 | Antifungal ( | |
| 7-Methyl-Z-tetradecen-1-o l acetate | 26.65 | 3.25 | 268 | Anticancer, anti-inflammatory, hepatoprotective | |
| Z-5-Methyl-6-heneicosen-11-one | 23.09 | 2.13 | 322 |
Major bioactive compounds identified from ethyl acetate crude of Alternaria sp. (isolate No. A8), sub-fraction (A8-3-2):
| Bioactive compound | RT (min) | Peak area% | MW | Chemical structure | Pharmacological actions |
|---|---|---|---|---|---|
| Phenol, 2,4-bis(1,1-dimethylethyl)- | 16.66 | 20.16 | 206 | Antibacterial and moderate cytotoxic. | |
| Dasycarpidan-1-methanol,acetate (ester) | 24.73 | 17.25 | 326 | Antimicrobial | |
| 9,10-Secocholesta-5,7,10(19)-triene-1,3-diol, 25-[(trimethylsilyl)oxy]-, (3á,5Z,7E)- (Calcitriol) | 12.8 | 16.02 | 488 | Anticancer, regulate calcium in human blood | |
| 1-Hexadecanol, acetate | 22.64 | 15.54 | 284 | ||
| Hexadecanoic acid, ethyl ester (Ethyl Palmitate) | 26.96 | 10.56 | 284 | Anti-inflammatory | |
| E-8-Methyl-9-tetradecen-1-ol acetate | 26.19 | 4.98 | 268 | Insect pheromone | |
| 9-Octadecenoic acid, (2-phenyl-1,3-dioxolan-4-yl)methyl ester, cis- | 29.1 | 1.56 | 444 |
Fig. 5GC-MS chromatogram of the active fraction of the ethyl acetate of Alternaria sp. (A8).
Fig. 6GC/MS chromatogram of volatile bioactive organic components derived from Alternaria sp. (isolate No. A8), sub-fraction A8-1-5.
Fig. 7GC/MS chromatogram of volatile bioactive organic components derived from Alternaria sp. (isolate No. A8), sub-fraction A8-1-6.
Fig. 8GC/MS chromatogram of volatile bioactive organic components derived from Alternaria sp. (isolate No. A8), sub-fraction A8-3-2.
Fig. 2Phylogenetic relationships of Alternaria sp. (A8) with phylogenetically related Alternaria species based on the nucleotide sequences of LSU rDNA. The tree is rooted to representatives of Didymellaceae. The maximum likelihood tree (ML) was constructed in MEGA7 (Tamura et al., 2013). Bootstrap support on the nodes represent ML and MP ≥ 50% respectively. Newly generated sequence in the present study is in blue.