| Literature DB >> 31301349 |
Yue Yuan1, Yetunde A Ayinuola1, Damini Singh1, Olawole Ayinuola1, Jeffrey A Mayfield1, Adam Quek2, James C Whisstock2, Ruby H P Law2, Shaun W Lee3, Victoria A Ploplis4, Francis J Castellino5.
Abstract
VEK50 is a truncated peptide from a Streptococcal pyogenes surface human plasminogen (hPg) binding M-protein (PAM). VEK50 contains the full A-domain of PAM, which is responsible for its low nanomolar binding to hPg. The interaction of VEK50 with kringle 2, the PAM-binding domain in hPg (K2hPg), has been studied by high-resolution NMR spectroscopy. The data show that each VEK50 monomer in solution contains two tight binding sites for K2hPg, one each in the a1- (RH1; R17H18) and a2- (RH2; R30H31) repeats within the A-domain of VEK50. Two mutant forms of VEK50, viz., VEK50[RH1/AA] (VEK50ΔRH1) and VEK50[RH2/AA] (VEK50ΔRH2), were designed by replacing each RH with AA, thus eliminating one of the K2hPg binding sites within VEK50, and allowing separate study of each binding site. Using 13C- and 15N-labeled peptides, NMR-derived solution structures of VEK50 in its complex with K2hPg were solved. We conclude that the A-domain of PAM can accommodate two molecules of K2hPg docked within a short distance of each other, and the strength of the binding is slightly different for each site. The solution structure of the VEK50/K2hPg, complex, which is a reductionist model of the PAM/hPg complex, provides insights for the binding mechanism of PAM to a host protein, a process that is critical to S. pyogenes virulence.Entities:
Keywords: 3-D solution structure; A-repeats; Bacterial receptor; Modular proteins; NMR structures; Peptide mutagenesis; Plasminogen binding
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Year: 2019 PMID: 31301349 PMCID: PMC6983471 DOI: 10.1016/j.jsb.2019.07.005
Source DB: PubMed Journal: J Struct Biol ISSN: 1047-8477 Impact factor: 2.867