| Literature DB >> 31295307 |
Elaine Stur1,2, Andrés Felipe Aristizabal-Pachon3,4, Kamila Chagas Peronni3,4, Lidiane Pignaton Agostini1,2, Sabine Waigel5, Julia Chariker6, Donald M Miller7, Shelia Dian Thomas7, Francine Rezzoug7, Raquel Spinassé Detogni1,2, Raquel Silva Dos Reis1,2, Wilson Araujo Silva Junior3,4, Iuri Drumond Louro1,2.
Abstract
Glyphosate is a broad-spectrum herbicide that is used worldwide. It represents a potential harm to surface water, and when commercially mixed with surfactants, its uptake is greatly magnified. The most well-known glyphosate-based product is Roundup. This herbicide is potentially an endocrine disruptor and many studies have shown the cytotoxicity potential of glyphosate-based herbicides. In breast cancer (BC) cell lines it has been demonstrated that glyphosate can induce cellular proliferation via estrogen receptors. Therefore, we aimed to identify gene expression changes in ER+ and ER- BC cell lines treated with Roundup and AMPA, to address changes in canonical pathways that would be related or not with the ER pathway, which we believe could interfere with cell proliferation. Using the Human Transcriptome Arrays 2.0, we identified gene expression changes in MCF-7 and MDA-MB-468 exposed to low concentrations and short exposure time to Roundup Original and AMPA. The results showed that at low concentration (0.05% Roundup) and short exposure (48h), both cell lines suffered deregulation of 11 canonical pathways, the most important being cell cycle and DNA damage repair pathways. Enrichment analysis showed similar results, except that MDA-MB-468 altered mainly metabolic processes. In contrast, 48h 10mM AMPA showed fewer differentially expressed genes, but also mainly related with metabolic processes. Our findings suggest that Roundup affects survival due to cell cycle deregulation and metabolism changes that may alter mitochondrial oxygen consumption, increase ROS levels, induce hypoxia, damage DNA repair, cause mutation accumulation and ultimately cell death. To our knowledge, this is the first study to analyze the effects of Roundup and AMPA on gene expression in triple negative BC cells. Therefore, we conclude that both compounds can cause cellular damage at low doses in a relatively short period of time in these two models, mainly affecting cell cycle and DNA repair.Entities:
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Year: 2019 PMID: 31295307 PMCID: PMC6622539 DOI: 10.1371/journal.pone.0219610
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Fig 1Results of cell viability (MTT assay) of MCF-7 and MDA-MB-468 after treatments with Roundup and AMPA.
Controls for both groups were untreated cells. AMPA concentrations were between 0.01-10mM. Roundup dilution was based on % (v/v), and concentrations of 0.01%-0.30% were used.
Fig 2Venn diagram.
The figure shows the number of common DEGS for both cell lines and treatments. Only 3 genes were common among all conditions.
Differentially expressed genes, downregulated in two cell lines after Roundup and AMPA treatments.
| Fold-change | ||||
|---|---|---|---|---|
| Gene Symbol | MDA- AMPA | MDA- Roundup | MCF-7- AMPA | MCF-7- Roundup |
| -3.39378 | -3.19528 | -2.08295 | -1.94162 | |
| -1.97305 | -2.36339 | -2.02376 | -2.48821 | |
| -2.30474 | -4.52354 | -1.71906 | -3.93362 | |
Fig 3The hierarchical distribution of the Top 500 DEGs.
Top 10 process networks and GO cellular processes to MCF-7 and MDA-MB-468 treated with Roundup.
| Cell cycle_S phase | 1.90E-18 | Cell cycle | 3.943E-41 |
| DNA damage_Checkpoint | 5.411E-14 | Cellular metabolic process | 1.067E-40 |
| Cell cycle_Core | 2.114E-11 | Mitotic cell cycle | 2.625E-40 |
| Cell cycle_G1-S | 4.673E-07 | Cell cycle process | 9.226E-38 |
| Cell cycle_G2-M | 5.459E-07 | Cellular macromolecule metabolic process | 1.555E-36 |
| DNA damage_DBS repair | 3.781E-06 | Cellular response to stress | 1.652E-36 |
| Cell cycle_Mitosis | 9.690E-06 | Nucleobase-containing compound metabolic process | 1.100E-35 |
| DNA damage_MMR repair | 4.794E-05 | Organic cyclic compound metabolic process | 3.301E-35 |
| Apoptosis_Apoptotic nucleus | 4.794E-05 | Mitotic cell cycle process | 7.841E-35 |
| Cell cycle_Meiosis | 2.837E-04 | Nucleic acid metabolic process | 1.242E-34 |
| Cell cycle_S phase | 5.484E-05 | Cellular metabolic process | 1.153E-16 |
| DNA damage_Checkpoint | 4.621E-03 | Primary metabolic process | 1.170E-15 |
| Reproduction_FSH-beta signaling pathway | 1.915E-02 | Cellular macromolecule metabolic process | 3.385E-15 |
| Cell cycle_G1-S | 1.915E-02 | Metabolic process | 3.178E-14 |
| Cell cycle_G2-M | 1.915E-02 | Organic substance metabolic process | 1.328E-13 |
| Apoptosis_Apoptotic nucleus | 2.516E-02 | Cellular process | 3.276E-13 |
| Protein folding_Response to unfolded proteins | 2.516E-02 | Nitrogen compound metabolic process | 7.355E-13 |
| Cytoskeleton_Intermediate filaments | 2.516E-02 | Mitotic cell cycle | 7.355E-13 |
| Development_Blood vessel morphogenesis | 3.680E-02 | Regulation of cellular metabolic process | 6.546E-12 |
| Proliferation_Negative regulation of cell proliferation | 3.680E-02 | Cell cycle | 1.088E-11 |
Statistically significant GO cellular processes for MCF-7 and MDA-MB-468 treated with AMPA.
| Response to abiotic stimulus | 3.701E-03 |
| NADH regeneration | 3.701E-03 |
| Glucose catabolic process to pyruvate | 3.701E-03 |
| Canonical glycolysis | 3.701E-03 |
| Glycolytic process through glucose-6-phosphate | 3.701E-03 |
| Glycolytic process through fructose-6-phosphate | 3.701E-03 |
| Glucose catabolic process | 3.701E-03 |
| Positive regulation of release of cytochrome c from mitochondria | 3.701E-03 |
| Cellular response to hypoxia | 3.701E-03 |
| Cellular response to decreased oxygen levels | 3.826E-03 |
| Doxorubicin metabolic process | 7.606E-08 |
| Daunorubicin metabolic process | 7.606E-08 |
| Polyketide metabolic process | 7.606E-08 |
| Aminoglycoside antibiotic metabolic process | 1.246E-07 |
| Single-organism cellular process | 1.859E-07 |
| Small molecule biosynthetic process | 1.859E-07 |
| Cellular response to decreased oxygen levels | 4.617E-07 |
| Cellular response to oxygen levels | 9.563E-07 |
| Alcohol biosynthetic process | 9.844E-07 |
| Single-organism biosynthetic process | 1.072E-06 |
Results of enrichment analysis (GO cellular processes) after exclusion of common genes from Roundup.
| MCF-7- Roundup | MDA-MB-468- Roundup | ||
|---|---|---|---|
| Cellular component organization or biogenesis | 5.555E-29 | Regulation of cellular metabolic process | 1.415E-13 |
| Cell cycle | 5.977E-28 | Tissue development | 1.415E-13 |
| Organic cyclic compound metabolic process | 2.161E-26 | Regulation of macromolecule metabolic process | 3.462E-13 |
| Cellular component organization | 6.472E-26 | Regulation of nitrogen compound metabolic process | 7.725E-13 |
| Cellular metabolic process | 1.651E-25 | Anatomical structure morphogenesis | 7.725E-13 |
| Nucleobase-containing compound metabolic process | 4.998E-25 | Regulation of metabolic process | 7.725E-13 |
| Cellular nitrogen compound metabolic process | 1.727E-24 | Tissue morphogenesis | 1.360E-12 |
| Nucleic acid metabolic process | 1.764E-24 | Regulation of primary metabolic process | 2.495E-12 |
| Cellular aromatic compound metabolic process | 6.957E-24 | Single-organism cellular process | 2.495E-12 |
| Heterocycle metabolic process | 8.398E-24 | Anatomical structure formation involved in morphogenesis | 3.331E-12 |
Fig 4Figure shows 11 canonical pathways included in the DEGS found for both cell lines and treatments.
Color intensity correlates with pathway alteration levels.