Literature DB >> 31288593

Integrated Robotic Mini Bioreactor Platform for Automated, Parallel Microbial Cultivation With Online Data Handling and Process Control.

Benjamin Haby1, Sebastian Hans1, Emmanuel Anane1, Annina Sawatzki1, Niels Krausch1, Peter Neubauer1, Mariano Nicolas Cruz Bournazou1.   

Abstract

During process development, the experimental search space is defined by the number of experiments that can be performed in specific time frames but also by its sophistication (e.g., inputs, sensors, sampling frequency, analytics). High-throughput liquid-handling stations can perform a large number of automated experiments in parallel. Nevertheless, the experimental data sets that are obtained are not always relevant for development of industrial bioprocesses, leading to a high rate of failure during scale-up. We present an automated mini bioreactor platform that enables parallel cultivations in the milliliter scale with online monitoring and control, well-controlled conditions, and advanced feeding strategies similar to industrial processes. The combination of two liquid handlers allows both automated mini bioreactor operation and at-line analysis in parallel. A central database enables end-to-end data exchange and fully integrated device and process control. A model-based operation algorithm allows for the accurate performance of complex cultivations for scale-down studies and strain characterization via optimal experimental redesign, significantly increasing the reliability and transferability of data throughout process development. The platform meets the tradeoff between experimental throughput and process control and monitoring comparable to laboratory-scale bioreactors.

Keywords:  high-throughput bioprocess development; high-throughput screening; mini bioreactor operation; parallel microbial cultivation; strain phenotyping

Mesh:

Substances:

Year:  2019        PMID: 31288593     DOI: 10.1177/2472630319860775

Source DB:  PubMed          Journal:  SLAS Technol        ISSN: 2472-6303            Impact factor:   3.047


  6 in total

Review 1.  Robotics for enzyme technology: innovations and technological perspectives.

Authors:  Mandeep Dixit; Kusum Panchal; Dharini Pandey; Nikolaos E Labrou; Pratyoosh Shukla
Journal:  Appl Microbiol Biotechnol       Date:  2021-05-10       Impact factor: 4.813

2.  Potential of Integrating Model-Based Design of Experiments Approaches and Process Analytical Technologies for Bioprocess Scale-Down.

Authors:  Peter Neubauer; Emmanuel Anane; Stefan Junne; Mariano Nicolas Cruz Bournazou
Journal:  Adv Biochem Eng Biotechnol       Date:  2021       Impact factor: 2.635

3.  Process Development for Benzyl Alcohol Production by Whole-Cell Biocatalysis in Stirred and Packed Bed Reactors.

Authors:  Carlos J C Rodrigues; Carla C C R de Carvalho
Journal:  Microorganisms       Date:  2022-05-03

4.  Enabling high-throughput biology with flexible open-source automation.

Authors:  Emma J Chory; Dana W Gretton; Erika A DeBenedictis; Kevin M Esvelt
Journal:  Mol Syst Biol       Date:  2021-03       Impact factor: 11.429

5.  Automated Conditional Screening of Multiple Escherichia coli Strains in Parallel Adaptive Fed-Batch Cultivations.

Authors:  Sebastian Hans; Benjamin Haby; Niels Krausch; Tilman Barz; Peter Neubauer; Mariano Nicolas Cruz-Bournazou
Journal:  Bioengineering (Basel)       Date:  2020-11-11

6.  Automation assisted anaerobic phenotyping for metabolic engineering.

Authors:  Kaushik Raj; Naveen Venayak; Patrick Diep; Sai Akhil Golla; Alexander F Yakunin; Radhakrishnan Mahadevan
Journal:  Microb Cell Fact       Date:  2021-09-23       Impact factor: 5.328

  6 in total

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