Literature DB >> 31283498

Retinal Vascular Network Topology Reconstruction and Artery/Vein Classification via Dominant Set Clustering.

Yitian Zhao, Jianyang Xie, Huaizhong Zhang, Yalin Zheng, Yifan Zhao, Hong Qi, Yangchun Zhao, Pan Su, Jiang Liu, Yonghuai Liu.   

Abstract

The estimation of vascular network topology in complex networks is important in understanding the relationship between vascular changes and a wide spectrum of diseases. Automatic classification of the retinal vascular trees into arteries and veins is of direct assistance to the ophthalmologist in terms of diagnosis and treatment of eye disease. However, it is challenging due to their projective ambiguity and subtle changes in appearance, contrast, and geometry in the imaging process. In this paper, we propose a novel method that is capable of making the artery/vein (A/V) distinction in retinal color fundus images based on vascular network topological properties. To this end, we adapt the concept of dominant set clustering and formalize the retinal blood vessel topology estimation and the A/V classification as a pairwise clustering problem. The graph is constructed through image segmentation, skeletonization, and identification of significant nodes. The edge weight is defined as the inverse Euclidean distance between its two end points in the feature space of intensity, orientation, curvature, diameter, and entropy. The reconstructed vascular network is classified into arteries and veins based on their intensity and morphology. The proposed approach has been applied to five public databases, namely INSPIRE, IOSTAR, VICAVR, DRIVE, and WIDE, and achieved high accuracies of 95.1%, 94.2%, 93.8%, 91.1%, and 91.0%, respectively. Furthermore, we have made manual annotations of the blood vessel topologies for INSPIRE, IOSTAR, VICAVR, and DRIVE datasets, and these annotations are released for public access so as to facilitate researchers in the community.

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Year:  2019        PMID: 31283498     DOI: 10.1109/TMI.2019.2926492

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  4 in total

1.  The RETA Benchmark for Retinal Vascular Tree Analysis.

Authors:  Xingzheng Lyu; Li Cheng; Sanyuan Zhang
Journal:  Sci Data       Date:  2022-07-11       Impact factor: 8.501

2.  Immersive VR Network Management Analysis considering Automatic Topology Discovery Algorithms.

Authors:  Jing He
Journal:  Comput Intell Neurosci       Date:  2022-09-02

3.  Scalable robust graph and feature extraction for arbitrary vessel networks in large volumetric datasets.

Authors:  Dominik Drees; Aaron Scherzinger; René Hägerling; Friedemann Kiefer; Xiaoyi Jiang
Journal:  BMC Bioinformatics       Date:  2021-06-26       Impact factor: 3.169

Review 4.  Review of Machine Learning Applications Using Retinal Fundus Images.

Authors:  Yeonwoo Jeong; Yu-Jin Hong; Jae-Ho Han
Journal:  Diagnostics (Basel)       Date:  2022-01-06
  4 in total

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