| Literature DB >> 31275353 |
Briseida E Feliciano-Astacio1, Katrina Celis2, Jairo Ramos2, Farid Rajabli2, Larry Deon Adams2, Alejandra Rodriguez1, Vanessa Rodriguez2, Parker L Bussies2, Carolina Sierra1, Patricia Manrique2, Pedro R Mena2, Antonella Grana2, Michael Prough2, Kara L Hamilton-Nelson2, Nereida Feliciano3, Angel Chinea1, Heriberto Acosta4, Jacob L McCauley2, Jeffery M Vance2, Gary W Beecham2, Margaret A Pericak-Vance2, Michael L Cuccaro2.
Abstract
INTRODUCTION: Puerto Ricans, the second largest Latino group in the continental US, are underrepresented in genomic studies of Alzheimer disease (AD). To increase representation of this group in genomic studies of AD, we developed a multisource ascertainment approach to enroll AD patients, and their family members living in Puerto Rico (PR) as part of the Alzheimer's Disease Sequencing Project (ADSP), an international effort to advance broader personalized/precision medicine initiatives for AD across all populations.Entities:
Keywords: ADSP; Alzheimer disease; PRADI; ascertainment; community resources; diversity; genetics; health disparities
Year: 2019 PMID: 31275353 PMCID: PMC6593074 DOI: 10.3389/fgene.2019.00538
Source DB: PubMed Journal: Front Genet ISSN: 1664-8021 Impact factor: 4.599
FIGURE 1Percentages of PRADI Ascertainment (N = 674) by Puerto Rico Department of Health Regions.
Ascertainment by health regions and municipalities (N = 674).
| Ponce | Arecibo | Mayagüez | Metro | Bayamón | Caguas | Fajardo | |
|---|---|---|---|---|---|---|---|
| Population (%) | 565,683 (15%) | 456,036 (12%) | 535,488 (14%) | 822,562 (22%) | 620,110 (16%) | 589,795 (16%) | 136,115 (4%) |
| Ascertainment (%) | 23 (3%) | 41 (6%) | 49 (7%) | 295 (44%) | 106 (16%) | 134 (20%) | 26 (4%) |
| Ascertainment by municipalities ( | Ponce | Arecibo | Aguadilla | San Juan | Bayamón | Cidra | Fajardo |
| Juana Díaz | Manatí ( | Mayagüez ( | Carolina | Naranjito | Cayey | Luquillo | |
| Yauco | San Germán ( | Guaynabo ( | Orocovis ( | Caguas ( | Ceiba | ||
| Adjuntas | Lajas | Trujillo Alto | Toa Alta | Naguabo | Rio Grande | ||
| Guayama | Hormigueros | Canovanas ( | Toa Baja | Humacao ( | Vieques | ||
| Isabela | Loíza | San | |||||
Ascertainment by source (N = 664)∗.
| AD specialist | Adult care center | Community | Total | |
|---|---|---|---|---|
| AD | 136 | 86 | 55 | 277 |
| % | (49%) | (31%) | (20%) | |
| MCI | 43 | 17 | 53 | 113 |
| % | (38%) | (15%) | (47%) | |
| UNAFF | 82 | 98 | 94 | 274 |
| % | (30%) | (36%) | (34%) | |
| Total | 261 | 201 | 202 | 664 |
FIGURE 2(A) Main components of multisource ascertainment approach and (B) resulting enrollment of study eligible individuals per health regions and by source within the health regions.
FIGURE 3(A) Bar-plot of three way admixed Puerto Rican individuals estimated using ADMIXTURE software at K = 3. (B) Box-plot of average ancestries by health region.
FIGURE 4(A) Bar-plot of three way admixed Puerto Rican individuals for each of the health regions estimated using ADMIXTURE software at K = 3. (B) Box-plot of average ancestries by health region.
Mean age at onset (AAO) and 3MS values for cases (N = 397) by region and source (note sample sizes reflect missing values).
| Age at onset | 3MS | |||
|---|---|---|---|---|
| REGION | Mean ( | Mean ( | ||
| Arecibo | 27 | 71.6 (8.1) | 17 | 56.7 (27.4) |
| Bayamón | 69 | 73.1 (9.7) | 36 | 62.9 (19.8) |
| Caguas | 69 | 74.5 (9.9) | 35 | 63.3 (28.8) |
| Fajardo | 15 | 75.9 (9.6) | 3∗ | 70.0 (10.1)∗ |
| Mayagüez | 22 | 70.3 (7.4) | 19 | 46.3 (28.0) |
| Metro | 172 | 73.1 (9.0) | 101 | 69.5 (19.9) |
| Ponce | 18 | 73.4 (9.7) | 14 | 51.5 (24.6) |
| TOTAL | 392 | 73.2 (9.2) | 225 | 63.4 (68.4) |
| AD specialist | 176 | 70.5 (9.0) | 79 | 64.2 (27.6) |
| Adult care center | 102 | 76.5 (9.0) | 48 | 63.3 (18.9) |
| Community | 107 | 74.6 (7.9) | 92 | 63.1 (23.3) |
| TOTAL | 385 | 73.2 (9.3) | 219 | 63.5 (23.0) |