Literature DB >> 3126807

Two histidine residues are essential for ribonuclease T1 activity as is the case for ribonuclease A.

S Nishikawa1, H Morioka, H J Kim, K Fuchimura, T Tanaka, S Uesugi, T Hakoshima, K Tomita, E Ohtsuka, M Ikehara.   

Abstract

Ribonuclease T1 (RNase T1, EC 3.1.27.3) is a guanosine-specific ribonuclease that cleaves the 3',5'-phosphodiester linkage of single-stranded RNA. It is assumed that the reaction is generated by concerted acid-base catalysis between residues Glu-58 and His-92 or His-40. From the results of chemical modification and NMR studies, it appeared that the residue Glu-58 was indispensable for nucleolytic activity. However, we have recently demonstrated that Glu-58 is an important but not an essential residue for catalytic activity, using the methods of genetic engineering to change Glu-58 to Gln-58 etc [Nishikawa, S., Morioka, H., Fuchimura, K., Tanaka, T., Uesugi, S., Ohtsuka, E., & Ikehara, M. (1986) Biochem. Biophys. Res. Commun. 138, 789-794]. In the present paper, we report that mutants of RNase T1 with residue Ala-40 or Ala-92 have almost no activity, while mutants that contain Ala-58 retain considerable activity. These results show that the two histidine residues, His-40 and His-92, but not Glu-58, are indispensable for the catalytic activity of the enzyme. We propose a revised reaction mechanism in which two histidine residues play a major role, as they do in the case of RNase A.

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Year:  1987        PMID: 3126807     DOI: 10.1021/bi00400a019

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  14 in total

1.  Sequence-specific artificial ribonucleases. I. Bis-imidazole-containing oligonucleotide conjugates prepared using precursor-based strategy.

Authors:  Natalia G Beloglazova; Martin M Fabani; Marina A Zenkova; Elena V Bichenkova; Nikolai N Polushin; Vladimir V Sil'nikov; Kenneth T Douglas; Valentin V Vlassov
Journal:  Nucleic Acids Res       Date:  2004-07-23       Impact factor: 16.971

Review 2.  T2 Family ribonucleases: ancient enzymes with diverse roles.

Authors:  Natalie Luhtala; Roy Parker
Journal:  Trends Biochem Sci       Date:  2010-02-26       Impact factor: 13.807

3.  Molecular dynamics simulations of ribonuclease T1. Effect of solvent on the interaction with 2'GMP.

Authors:  A D MacKerell; R Rigler; L Nilsson; U Heinemann; W Saenger
Journal:  Eur Biophys J       Date:  1988       Impact factor: 1.733

4.  Cyclic oxyphosphoranes as model intermediates during splicing and cleavage of RNA: ab initio molecular orbital calculations on the conformational analysis.

Authors:  K Taira; M Uebayasi; K Furukawa
Journal:  Nucleic Acids Res       Date:  1989-05-25       Impact factor: 16.971

5.  Identification of functionally relevant histidine residues in the apoptotic nuclease CAD.

Authors:  G Meiss; S R Scholz; C Korn; O Gimadutdinow; A Pingoud
Journal:  Nucleic Acids Res       Date:  2001-10-01       Impact factor: 16.971

6.  A catalytic function for the structurally conserved residue Phe 100 of ribonuclease T1.

Authors:  J Doumen; M Gonciarz; I Zegers; R Loris; L Wyns; J Steyaert
Journal:  Protein Sci       Date:  1996-08       Impact factor: 6.725

7.  The phage T4 restriction endoribonuclease RegB: a cyclizing enzyme that requires two histidines to be fully active.

Authors:  Fakhri Saïda; Marc Uzan; François Bontems
Journal:  Nucleic Acids Res       Date:  2003-06-01       Impact factor: 16.971

8.  Hydration water molecules of nucleotide-free RNase T1 studied by NMR spectroscopy in solution.

Authors:  S Pfeiffer; N Spitzner; F Löhr; H Rüterjans
Journal:  J Biomol NMR       Date:  1998-01       Impact factor: 2.835

9.  A novel family of sequence-specific endoribonucleases associated with the clustered regularly interspaced short palindromic repeats.

Authors:  Natalia Beloglazova; Greg Brown; Matthew D Zimmerman; Michael Proudfoot; Kira S Makarova; Marina Kudritska; Samvel Kochinyan; Shuren Wang; Maksymilian Chruszcz; Wladek Minor; Eugene V Koonin; Aled M Edwards; Alexei Savchenko; Alexander F Yakunin
Journal:  J Biol Chem       Date:  2008-05-15       Impact factor: 5.157

10.  Transition State Charge Stabilization and Acid-Base Catalysis of mRNA Cleavage by the Endoribonuclease RelE.

Authors:  Brian F Dunican; David A Hiller; Scott A Strobel
Journal:  Biochemistry       Date:  2015-11-12       Impact factor: 3.162

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