Literature DB >> 31263262

How to support open-source software and stay sane.

Anna Nowogrodzki.   

Abstract

Keywords:  Computational biology and bioinformatics; Computer science; Software

Mesh:

Year:  2019        PMID: 31263262     DOI: 10.1038/d41586-019-02046-0

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


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  5 in total

1.  Neuroscience Cloud Analysis As a Service: An open-source platform for scalable, reproducible data analysis.

Authors:  Taiga Abe; Ian Kinsella; Shreya Saxena; E Kelly Buchanan; Joao Couto; John Briggs; Sian Lee Kitt; Ryan Glassman; John Zhou; Liam Paninski; John P Cunningham
Journal:  Neuron       Date:  2022-07-22       Impact factor: 18.688

Review 2.  Better together: Elements of successful scientific software development in a distributed collaborative community.

Authors:  Julia Koehler Leman; Brian D Weitzner; P Douglas Renfrew; Steven M Lewis; Rocco Moretti; Andrew M Watkins; Vikram Khipple Mulligan; Sergey Lyskov; Jared Adolf-Bryfogle; Jason W Labonte; Justyna Krys; Christopher Bystroff; William Schief; Dominik Gront; Ora Schueler-Furman; David Baker; Philip Bradley; Roland Dunbrack; Tanja Kortemme; Andrew Leaver-Fay; Charlie E M Strauss; Jens Meiler; Brian Kuhlman; Jeffrey J Gray; Richard Bonneau
Journal:  PLoS Comput Biol       Date:  2020-05-04       Impact factor: 4.475

3.  A field guide to cultivating computational biology.

Authors:  Gregory P Way; Casey S Greene; Piero Carninci; Benilton S Carvalho; Michiel de Hoon; Stacey D Finley; Sara J C Gosline; Kim-Anh Lȇ Cao; Jerry S H Lee; Luigi Marchionni; Nicolas Robine; Suzanne S Sindi; Fabian J Theis; Jean Y H Yang; Anne E Carpenter; Elana J Fertig
Journal:  PLoS Biol       Date:  2021-10-07       Impact factor: 8.029

Review 4.  Developing image analysis methods for digital pathology.

Authors:  Peter Bankhead
Journal:  J Pathol       Date:  2022-05-23       Impact factor: 9.883

5.  bertha: Project skeleton for scientific software.

Authors:  Michael Riesch; Tien Dat Nguyen; Christian Jirauschek
Journal:  PLoS One       Date:  2020-03-23       Impact factor: 3.240

  5 in total

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