| Literature DB >> 31261722 |
Yanjing Dong1, Daning Shi2, Yuan Ying1, Xinping Xi1, Xiaoling Chen3, Lei Wang1, Mei Zhou1, Qinan Wu4, Chengbang Ma5, Tianbao Chen1.
Abstract
Protease inhibitors that were identified from amphibian skin secretions with low molecular weights and potent inhibitory activity were thought to be potential candidates for novel peptide drugs. Here, a novel peptide with trypsin inhibitory activity was found in the skin secretion of the Chinese bamboo leaf odorous frog, Odorrana versabilis. Based on the sequence alignments of sequencing results, the novel peptide (ALKYPFRCKAAFC) was named as Kunitzin-OV. The synthetic replicate of Kunitzin-OV was subjected to a series of functional assays, and it exhibited a trypsin inhibitory activity with a Ki value of 3.042 µM, whereas, when Lys-9 at P1 position was substituted by Phe, trypsin inhibitory activity was undetected and the chymotrypsin inhibitory activity was optimized with a Ki value of 2.874 µM. However, its protease-binding loop was catabolized by trypsin during the trypsin cleavage test. In conclusion, Kunizin-OV is a novel peptide with trypsin inhibitory activity as a member of kunitzins, which is a non-typical Kunitz-like trypsin inhibitor with a highly conserved reactive site (K-A) and quite a short sequence.Entities:
Keywords: Kunitz-type inhibitors; frog skin secretion; kunitzins; trypsin inhibitor
Mesh:
Substances:
Year: 2019 PMID: 31261722 PMCID: PMC6681348 DOI: 10.3390/biom9070254
Source DB: PubMed Journal: Biomolecules ISSN: 2218-273X
Figure 1The open-reading frame of the biosynthetic precursor of Kunitzin-OV. The putative signal peptide is double-underlined, the mature peptide is single-underlined, and an asterisk indicates the stop codon.
Figure 2The primary structure of the novel Kunitzin-OV from Odorrana versabilis skin secretion compared with other kunitzins. Fully conserved residues are highlighted.
Figure 3The identification and characterisation of Kunitzin-OV: (a) the 240 min reverse-phase high-performance liquid chromatography (HPLC) chromatogram of the skin secretion of Odorrana versabilis. The elution position is indicated with an arrow. The components were monitored at a wavelength of 214 nm; (b) peptide fragment spectrum collected on an LCQ Fleet ion trap mass spectrometer. The peptide was fragmented randomly at each peptide bond, b- and y-ions are indicated in blue and red.
Sequences and physicochemical properties of Kunitzin-OV and its Phe-substituted variant.
| Sequence | Net Charge | GRAVY 1 | |
|---|---|---|---|
| Kunitzin-OV | ALKYPFRCKAAFC | +3 | 0.354 |
| F9-Kunitzin-OV | ALKYPFRCFAAFC | +2 | 0.869 |
1 GRAVY—the grand average of hydropathicity.
Minimum inhibitory concentrations (MICs) determined for the Gram-positive bacterium, Staphylococcus aureus (S. aureus), the Gram-negative bacterium, Escherichia coli (E. coli), and the yeast, Candida albicans (C. albicans) with Kunitzin-OV and Kunitzin-OV variant. The blank control was established by the culture medium, and the positive control represented growth culture.
| Peptides | Sequence | Minimum Inhibitory Concentration (µM) | ||
|---|---|---|---|---|
|
|
|
| ||
| Kunitzin-OV | ALKYPFRCKAAFC | 512 | 512 | 512 |
| F9-Kunitzin-OV | ALKYPFRCFAAFC | 512 | 512 | 512 |
Figure 4The haemolytic activity of Kunitzin-OV and F9-Kunitzin-OV against horse blood cells. Triton X-100 was severed as a positive control with 100% haemolysis.
Figure 5The cell membrane permeability of Kunitzin-OV with phosphate-buffered saline (PBS) as a negative control and melittin as a positive control.
Figure 6Trypsin/chymotrypsin inhibitory activities: (a) Reactive curves and corresponding Morrison plot of trypsin inhibition of Kunitzin-OV in various concentrations; (b) Reactive curves and corresponding Morrison plot of chymotrypsin inhibition of F9-Kunitzin-OV in various concentrations; (c) Reactive curves and corresponding Morrison plot of trypsin inhibition of ovomucoid inhibitor (chicken) in various concentrations.
Figure 7The trypsin cleavage results obtained by matrix-assisted laser desorption ionization time-of-flight (MALDI-TOF) analysis for Kunitzin-OV from different time points, (a–f): 0 min, 1 min, 2 min, 5 min, 10 min, and 20 min. The obtained fragments are marked in the figure.
Comparison of the reactive sites of Kunitzin-OV with different kinds of Kunitz-type protease inhibitors. The reactive sites are highlighted.
| Name | Sequence Length | Reactive Site | Source |
|---|---|---|---|
| Kunitzin-OV | 13 | -F R C K A A F- | This study |
| VKTO1_HAPHA | 55 | -G R C K A S F- | UniProtKB-D2Y2Q6 |
| VKTCT_OPHHA | 58 | -G F C K A Y I- | UniProtKB-B6RLX2 |
| BPT1_BOVIN | 58 | -G P C K A R I- | UniProtKB-P00974 |
| CSTI_BOMMO | 55 | -G P C K G S F- | UniProtKB-P81902 |
| SPIT2_HUMAN domain 2 | 51 | -G P C R A S F- | UniProtKB-O43291 |
| AMBP_HUMAN domain 2 | 51 | -G P C R A F I- | UniProtKB-P02760 |
| VKT_OXYSC | 51 | -G P C R A A I- | UniProtKB-B7S4N9 |