Literature DB >> 31260285

SLIRP Interacts with Helicases to Facilitate 2'-O-Methylation of rRNA and to Promote Translation.

Lin Li1, Weili Miao1, Preston Williams1, Cheng Guo1, Yinsheng Wang1.   

Abstract

SRA stem-loop-interacting RNA-binding protein (SLIRP) is a versatile protein that can interact with the stem-loop structure in RNA and with G quadruplex DNA. By using a quantitative proteomic experiment, we found that SLIRP interacts with the majority of the human helicase proteome. We also found that these interactions facilitate 2'-O-methylation of a number of nucleosides in rRNA and promote protein translation. Hence, we uncovered a novel function of SLIRP protein and offered novel mechanistic insights into its function as a RNA chaperone and into the regulation of 2'-O-methylation of rRNA.

Entities:  

Year:  2019        PMID: 31260285      PMCID: PMC6948719          DOI: 10.1021/jacs.9b04424

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  19 in total

1.  High-Throughput Mapping of 2'-O-Me Residues in RNA Using Next-Generation Sequencing (Illumina RiboMethSeq Protocol).

Authors:  Virginie Marchand; Lilia Ayadi; Aseel El Hajj; Florence Blanloeil-Oillo; Mark Helm; Yuri Motorin
Journal:  Methods Mol Biol       Date:  2017

2.  SLIRP, a small SRA binding protein, is a nuclear receptor corepressor.

Authors:  Esme C Hatchell; Shane M Colley; Dianne J Beveridge; Michael R Epis; Lisa M Stuart; Keith M Giles; Andrew D Redfern; Lauren E C Miles; Andrew Barker; Louisa M MacDonald; Peter G Arthur; James C K Lui; Jemma L Golding; Ross K McCulloch; Cecily B Metcalf; Jackie A Wilce; Matthew C J Wilce; Rainer B Lanz; Bert W O'Malley; Peter J Leedman
Journal:  Mol Cell       Date:  2006-06-09       Impact factor: 17.970

3.  RNA helicase DDX21 coordinates transcription and ribosomal RNA processing.

Authors:  Eliezer Calo; Ryan A Flynn; Lance Martin; Robert C Spitale; Howard Y Chang; Joanna Wysocka
Journal:  Nature       Date:  2014-11-24       Impact factor: 49.962

4.  Box C/D snoRNA-associated proteins: two pairs of evolutionarily ancient proteins and possible links to replication and transcription.

Authors:  D R Newman; J F Kuhn; G M Shanab; E S Maxwell
Journal:  RNA       Date:  2000-06       Impact factor: 4.942

5.  Identification of Helicase Proteins as Clients for HSP90.

Authors:  Weili Miao; Lin Li; Yinsheng Wang
Journal:  Anal Chem       Date:  2018-09-26       Impact factor: 6.986

6.  LRPPRC-mediated folding of the mitochondrial transcriptome.

Authors:  Stefan J Siira; Henrik Spåhr; Anne-Marie J Shearwood; Benedetta Ruzzenente; Nils-Göran Larsson; Oliver Rackham; Aleksandra Filipovska
Journal:  Nat Commun       Date:  2017-11-16       Impact factor: 14.919

7.  A computational screen for regulators of oxidative phosphorylation implicates SLIRP in mitochondrial RNA homeostasis.

Authors:  Joshua M Baughman; Roland Nilsson; Vishal M Gohil; Daniel H Arlow; Zareen Gauhar; Vamsi K Mootha
Journal:  PLoS Genet       Date:  2009-08-14       Impact factor: 5.917

8.  Evidence for rRNA 2'-O-methylation plasticity: Control of intrinsic translational capabilities of human ribosomes.

Authors:  Jenny Erales; Virginie Marchand; Baptiste Panthu; Sandra Gillot; Stéphane Belin; Sandra E Ghayad; Maxime Garcia; Florian Laforêts; Virginie Marcel; Agnès Baudin-Baillieu; Pierre Bertin; Yohann Couté; Annie Adrait; Mélanie Meyer; Gabriel Therizols; Marat Yusupov; Olivier Namy; Théophile Ohlmann; Yuri Motorin; Frédéric Catez; Jean-Jacques Diaz
Journal:  Proc Natl Acad Sci U S A       Date:  2017-11-20       Impact factor: 11.205

9.  Redundant role of DEAD box proteins p68 (Ddx5) and p72/p82 (Ddx17) in ribosome biogenesis and cell proliferation.

Authors:  Carolin Jalal; Heike Uhlmann-Schiffler; Hans Stahl
Journal:  Nucleic Acids Res       Date:  2007-05-07       Impact factor: 16.971

10.  SLIRP Regulates the Rate of Mitochondrial Protein Synthesis and Protects LRPPRC from Degradation.

Authors:  Marie Lagouge; Arnaud Mourier; Hyun Ju Lee; Henrik Spåhr; Timothy Wai; Christian Kukat; Eduardo Silva Ramos; Elisa Motori; Jakob D Busch; Stefan Siira; Elisabeth Kremmer; Aleksandra Filipovska; Nils-Göran Larsson
Journal:  PLoS Genet       Date:  2015-08-06       Impact factor: 5.917

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  1 in total

1.  Characterization of Neuronal RNA Modifications during Non-associative Learning in Aplysia Reveals Key Roles for tRNAs in Behavioral Sensitization.

Authors:  Kevin D Clark; Colin Lee; Rhanor Gillette; Jonathan V Sweedler
Journal:  ACS Cent Sci       Date:  2021-07-18       Impact factor: 14.553

  1 in total

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