Literature DB >> 31259044

Graph- and finite element-based total variation models for the inverse problem in diffuse optical tomography.

Wenqi Lu1, Jinming Duan1, David Orive-Miguel2,3, Lionel Herve2, Iain B Styles1.   

Abstract

Total variation (TV) is a powerful regularization method that has been widely applied in different imaging applications, but is difficult to apply to diffuse optical tomography (DOT) image reconstruction (inverse problem) due to unstructured discretization of complex geometries, non-linearity of the data fitting and regularization terms, and non-differentiability of the regularization term. We develop several approaches to overcome these difficulties by: i) defining discrete differential operators for TV regularization using both finite element and graph representations; ii) developing an optimization algorithm based on the alternating direction method of multipliers (ADMM) for the non-differentiable and non-linear minimization problem; iii) investigating isotropic and anisotropic variants of TV regularization, and comparing their finite element (FEM)- and graph-based implementations. These approaches are evaluated on experiments on simulated data and real data acquired from a tissue phantom. Our results show that both FEM and graph-based TV regularization is able to accurately reconstruct both sparse and non-sparse distributions without the over-smoothing effect of Tikhonov regularization and the over-sparsifying effect of L1 regularization. The graph representation was found to out-perform the FEM method for low-resolution meshes, and the FEM method was found to be more accurate for high-resolution meshes.

Year:  2019        PMID: 31259044      PMCID: PMC6583327          DOI: 10.1364/BOE.10.002684

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.732


  4 in total

1.  New nonlocal forward model for diffuse optical tomography.

Authors:  Wenqi Lu; Jinming Duan; Joshua Deepak Veesa; Iain B Styles
Journal:  Biomed Opt Express       Date:  2019-11-12       Impact factor: 3.732

2.  L1-L2 norm regularization via forward-backward splitting for fluorescence molecular tomography.

Authors:  Heng Zhang; Xiaowei He; Jingjing Yu; Xuelei He; Hongbo Guo; Yuqing Hou
Journal:  Biomed Opt Express       Date:  2021-11-29       Impact factor: 3.732

3.  Deep-learning based image reconstruction for MRI-guided near-infrared spectral tomography.

Authors:  Jinchao Feng; Wanlong Zhang; Zhe Li; Kebin Jia; Shudong Jiang; Hamid Dehghani; Brian W Pogue; Keith D Paulsen
Journal:  Optica       Date:  2022-02-24       Impact factor: 11.104

4.  Automatic 3D Bi-Ventricular Segmentation of Cardiac Images by a Shape-Refined Multi- Task Deep Learning Approach.

Authors:  Jinming Duan; Ghalib Bello; Jo Schlemper; Wenjia Bai; Timothy J W Dawes; Carlo Biffi; Antonio de Marvao; Georgia Doumoud; Declan P O'Regan; Daniel Rueckert
Journal:  IEEE Trans Med Imaging       Date:  2019-01-23       Impact factor: 10.048

  4 in total

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