Literature DB >> 31257079

New insights into the binding mode of pyridine-3-carboxamide inhibitors of E. coli DNA gyrase.

Sarah Narramore1, Clare E M Stevenson2, Anthony Maxwell2, David M Lawson2, Colin W G Fishwick3.   

Abstract

Previously we have reported on a series of pyridine-3-carboxamide inhibitors of DNA gyrase and DNA topoisomerase IV that were designed using a computational de novo design approach and which showed promising antibacterial properties. Herein we describe the synthesis of additional examples from this series aimed specifically at DNA gyrase, along with crystal structures confirming the predicted mode of binding and in vitro ADME data which describe the drug-likeness of these compounds.
Copyright © 2019. Published by Elsevier Ltd.

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Year:  2019        PMID: 31257079     DOI: 10.1016/j.bmc.2019.06.015

Source DB:  PubMed          Journal:  Bioorg Med Chem        ISSN: 0968-0896            Impact factor:   3.641


  9 in total

1.  De novo design of type II topoisomerase inhibitors as potential antimicrobial agents targeting a novel binding region.

Authors:  Kyle M Orritt; Lipeng Feng; Juliette F Newell; Jack N Sutton; Scott Grossman; Thomas Germe; Lauren R Abbott; Holly L Jackson; Benjamin K L Bury; Anthony Maxwell; Martin J McPhillie; Colin W G Fishwick
Journal:  RSC Med Chem       Date:  2022-06-16

2.  Antimicrobial Activity, in silico Molecular Docking, ADMET and DFT Analysis of Secondary Metabolites from Roots of Three Ethiopian Medicinal Plants.

Authors:  Mathewos Anza; Milkyas Endale; Luz Cardona; Diego Cortes; Rajalakshmanan Eswaramoorthy; Jesus Zueco; Hortensia Rico; Maria Trelis; Belen Abarca
Journal:  Adv Appl Bioinform Chem       Date:  2021-08-20

3.  Antibacterial and antioxidant activities of extracts and isolated compounds from the roots extract of Cucumis prophetarum and in silico study on DNA gyrase and human peroxiredoxin 5.

Authors:  Wario Galma; Milkyas Endale; Emebet Getaneh; Rajalakshmanan Eswaramoorthy; Temesgen Assefa; Yadessa Melaku
Journal:  BMC Chem       Date:  2021-05-06

4.  DeepFrag: An Open-Source Browser App for Deep-Learning Lead Optimization.

Authors:  Harrison Green; Jacob D Durrant
Journal:  J Chem Inf Model       Date:  2021-05-24       Impact factor: 4.956

5.  In silico Molecular Docking, DFT Analysis and ADMET Studies of Carbazole Alkaloid and Coumarins from Roots of Clausena anisata: A Potent Inhibitor for Quorum Sensing.

Authors:  Rajalakshmanan Eswaramoorthy; Hadgu Hailekiros; Fedlu Kedir; Milkyas Endale
Journal:  Adv Appl Bioinform Chem       Date:  2021-02-05

6.  Molecular docking analysis and evaluation of the antibacterial and antioxidant activities of the constituents of Ocimum cufodontii.

Authors:  Muhdin Aliye; Aman Dekebo; Hailemichael Tesso; Teshome Abdo; Rajalakshmanan Eswaramoorthy; Yadessa Melaku
Journal:  Sci Rep       Date:  2021-05-12       Impact factor: 4.379

7.  Antibacterial, Docking, DFT and ADMET Properties Evaluation of Chalcone-Sulfonamide Derivatives Prepared Using ZnO Nanoparticle Catalysis.

Authors:  Abdanne Weyesa; Rajalakshmanan Eswaramoorthy; Yadessa Melaku; Endale Mulugeta
Journal:  Adv Appl Bioinform Chem       Date:  2021-12-11

Review 8.  Ultrasound-assisted transition-metal-free catalysis: a sustainable route towards the synthesis of bioactive heterocycles.

Authors:  Biplob Borah; L Raju Chowhan
Journal:  RSC Adv       Date:  2022-05-11       Impact factor: 4.036

9.  Synthesis, antibacterial and antioxidant activities of Thiazole-based Schiff base derivatives: a combined experimental and computational study.

Authors:  Fitsum Lemilemu; Mamaru Bitew; Taye B Demissie; Rajalakshmanan Eswaramoorthy; Milkyas Endale
Journal:  BMC Chem       Date:  2021-12-23
  9 in total

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