Literature DB >> 31254113

Variations of type IV collagen-encoding genes in patients with histological diagnosis of focal segmental glomerulosclerosis.

Erol Demir1, Yasar Caliskan2.   

Abstract

Focal segmental glomerulosclerosis (FSGS), an important cause of end-stage kidney disease (ESKD), covers a spectrum of clinicopathological syndromes sharing a common glomerular lesion, based on an injury of podocytes caused by diverse insults to glomeruli. Although it is well expressed in many reports that the term FSGS is not useful and applicable to a single disease, particularly in genetic studies, FSGS continues to be used as a single clinical diagnosis. Distinguishing genetic forms of FSGS is important for the treatment and overall prognosis because secondary forms of FSGS, produced by rare pathogenic variations in podocyte genes, are not good candidates for immunosuppressive treatment. Over the past decade, several next generation sequencing (NGS) methods have been used to investigate the patients with steroid resistance nephrotic syndrome (SRNS) or FSGS. Pathogenic variants in COL4A3, COL4A4, or COL4A5 genes have been frequently identified in patients with histologic diagnosis of FSGS. The contribution of these mostly heterozygous genetic variations in FSGS pathogenesis and the clinical course of patients with these variations have not been well characterized. This review emphasizes the importance of appropriate approach in selection and diagnosis of cases and interpretation of the genetic data in these studies and suggests a detailed review of existing clinical variant databases using newly available population genetic data.

Entities:  

Keywords:  Collagen; Focal segmental glomerulosclerosis; Genetics; Next generation sequencing

Mesh:

Substances:

Year:  2019        PMID: 31254113     DOI: 10.1007/s00467-019-04282-y

Source DB:  PubMed          Journal:  Pediatr Nephrol        ISSN: 0931-041X            Impact factor:   3.714


  67 in total

1.  Characterization of assembly of recombinant type IV collagen alpha3, alpha4, and alpha5 chains in transfected cell strains.

Authors:  Takehiro Kobayashi; Makoto Uchiyama
Journal:  Kidney Int       Date:  2003-12       Impact factor: 10.612

2.  Spectrum of steroid-resistant and congenital nephrotic syndrome in children: the PodoNet registry cohort.

Authors:  Agnes Trautmann; Monica Bodria; Fatih Ozaltin; Alaleh Gheisari; Anette Melk; Marta Azocar; Ali Anarat; Salim Caliskan; Francesco Emma; Jutta Gellermann; Jun Oh; Esra Baskin; Joanna Ksiazek; Giuseppe Remuzzi; Ozlem Erdogan; Sema Akman; Jiri Dusek; Tinatin Davitaia; Ozan Özkaya; Fotios Papachristou; Agnieszka Firszt-Adamczyk; Tomasz Urasinski; Sara Testa; Rafael T Krmar; Lidia Hyla-Klekot; Andrea Pasini; Z Birsin Özcakar; Peter Sallay; Nilgun Cakar; Monica Galanti; Joelle Terzic; Bilal Aoun; Alberto Caldas Afonso; Hanna Szymanik-Grzelak; Beata S Lipska; Sven Schnaidt; Franz Schaefer
Journal:  Clin J Am Soc Nephrol       Date:  2015-01-29       Impact factor: 8.237

3.  Clinical utility of genetic testing in children and adults with steroid-resistant nephrotic syndrome.

Authors:  Sheila Santín; Gemma Bullich; Bárbara Tazón-Vega; Rafael García-Maset; Isabel Giménez; Irene Silva; Patricia Ruíz; José Ballarín; Roser Torra; Elisabet Ars
Journal:  Clin J Am Soc Nephrol       Date:  2011-03-17       Impact factor: 8.237

Review 4.  Pathologic classification of focal segmental glomerulosclerosis.

Authors:  Vivette D'Agati
Journal:  Semin Nephrol       Date:  2003-03       Impact factor: 5.299

Review 5.  Causes and pathogenesis of focal segmental glomerulosclerosis.

Authors:  Agnes B Fogo
Journal:  Nat Rev Nephrol       Date:  2014-12-02       Impact factor: 28.314

6.  COL4A3 mutations cause focal segmental glomerulosclerosis.

Authors:  Jingyuan Xie; Xiaoxi Wu; Hong Ren; Weiming Wang; Zhaohui Wang; Xiaoxia Pan; Xu Hao; Jun Tong; Jun Ma; Zhibin Ye; Guoyu Meng; Yufei Zhu; Krzysztof Kiryluk; Xiangyin Kong; Landian Hu; Nan Chen
Journal:  J Mol Cell Biol       Date:  2014-12       Impact factor: 6.216

7.  ACMG recommendations for standards for interpretation and reporting of sequence variations: Revisions 2007.

Authors:  C Sue Richards; Sherri Bale; Daniel B Bellissimo; Soma Das; Wayne W Grody; Madhuri R Hegde; Elaine Lyon; Brian E Ward
Journal:  Genet Med       Date:  2008-04       Impact factor: 8.822

8.  Evidence of digenic inheritance in Alport syndrome.

Authors:  Maria Antonietta Mencarelli; Laurence Heidet; Helen Storey; Michel van Geel; Bertrand Knebelmann; Chiara Fallerini; Nunzia Miglietti; Maria Fatima Antonucci; Francesco Cetta; John A Sayer; Arthur van den Wijngaard; Shu Yau; Francesca Mari; Mirella Bruttini; Francesca Ariani; Karin Dahan; Bert Smeets; Corinne Antignac; Frances Flinter; Alessandra Renieri
Journal:  J Med Genet       Date:  2015-01-09       Impact factor: 6.318

9.  Negative Staining for COL4A5 Correlates With Worse Prognosis and More Severe Ultrastructural Alterations in Males With Alport Syndrome.

Authors:  Samar M Said; Mary E Fidler; Anthony M Valeri; Brooke McCann; Wade Fiedler; Lynn D Cornell; Mariam Priya Alexander; Ahmed M Alkhunaizi; Anne Sullivan; Carl H Cramer; Marie C Hogan; Samih H Nasr
Journal:  Kidney Int Rep       Date:  2016-09-29

10.  Genetic Testing for Steroid-Resistant-Nephrotic Syndrome in an Outbred Population.

Authors:  Jennifer D Varner; Megan Chryst-Stangl; Christopher Imokhuede Esezobor; Adaobi Solarin; Guanghong Wu; Brandon Lane; Gentzon Hall; Asiri Abeyagunawardena; Ayo Matory; Tracy E Hunley; Jen Jar Lin; David Howell; Rasheed Gbadegesin
Journal:  Front Pediatr       Date:  2018-10-22       Impact factor: 3.418

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  4 in total

1.  Evaluation of Genetic Kidney Diseases in Living Donor Kidney Transplantation: Towards Precision Genomic Medicine in Donor Risk Assessment.

Authors:  Yasar Caliskan; Brian Lee; Adrian Whelan; Fadee Abualrub; Krista L Lentine; Arksarapuk Jittirat
Journal:  Curr Transplant Rep       Date:  2022-03-16

Review 2.  Approach to genetic testing to optimize the safety of living donor transplantation in Alport syndrome spectrum.

Authors:  Yasar Caliskan; Krista L Lentine
Journal:  Pediatr Nephrol       Date:  2022-01-27       Impact factor: 3.651

3.  High Incidence of COL4A Genetic Variants Among a Cohort of Children With Steroid-Resistant Nephrotic Syndrome From Eastern India.

Authors:  Rajiv Sinha; Arpita Ray Chaudhury; Subhankar Sarkar; Sushmita Banerjee; Smartya Pulai; Saugat Dasgupta; Mordi Muorah; Dipanjana Datta
Journal:  Kidney Int Rep       Date:  2022-01-17

4.  Novel heterozygous mutation in COL4A4 responsible for Alport syndrome in a Chinese family.

Authors:  Ran Du; Jishi Liu; Yiqiao Hu; Song Peng; Liangliang Fan; Rong Xiang; Hao Huang
Journal:  Front Genet       Date:  2022-09-09       Impact factor: 4.772

  4 in total

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