Literature DB >> 31252805

Using automatic differentiation as a general framework for ptychographic reconstruction.

Saugat Kandel, S Maddali, Marc Allain, Stephan O Hruszkewycz, Chris Jacobsen, Youssef S G Nashed.   

Abstract

Coherent diffraction imaging methods enable imaging beyond lens-imposed resolution limits. In these methods, the object can be recovered by minimizing an error metric that quantifies the difference between diffraction patterns as observed, and those calculated from a present guess of the object. Efficient minimization methods require analytical calculation of the derivatives of the error metric, which is not always straightforward. This limits our ability to explore variations of basic imaging approaches. In this paper, we propose to substitute analytical derivative expressions with the automatic differentiation method, whereby we can achieve object reconstruction by specifying only the physics-based experimental forward model. We demonstrate the generality of the proposed method through straightforward object reconstruction for a variety of complex ptychographic experimental models.

Year:  2019        PMID: 31252805      PMCID: PMC6825598          DOI: 10.1364/OE.27.018653

Source DB:  PubMed          Journal:  Opt Express        ISSN: 1094-4087            Impact factor:   3.894


  28 in total

1.  Phase retrieval by iterated projections.

Authors:  Veit Elser
Journal:  J Opt Soc Am A Opt Image Sci Vis       Date:  2003-01       Impact factor: 2.129

2.  Characterization of near-field ptychography.

Authors:  Richard M Clare; Marco Stockmar; Martin Dierolf; Irene Zanette; Franz Pfeiffer
Journal:  Opt Express       Date:  2015-07-27       Impact factor: 3.894

3.  Invited article: a [corrected] unified evaluation of iterative projection algorithms for phase retrieval.

Authors:  S Marchesini
Journal:  Rev Sci Instrum       Date:  2007-01       Impact factor: 1.523

4.  An improved ptychographical phase retrieval algorithm for diffractive imaging.

Authors:  Andrew M Maiden; John M Rodenburg
Journal:  Ultramicroscopy       Date:  2009-06-06       Impact factor: 2.689

5.  Fourier ptychographic reconstruction using Wirtinger flow optimization.

Authors:  Liheng Bian; Jinli Suo; Guoan Zheng; Kaikai Guo; Feng Chen; Qionghai Dai
Journal:  Opt Express       Date:  2015-02-23       Impact factor: 3.894

6.  High-resolution three-dimensional structural microscopy by single-angle Bragg ptychography.

Authors:  S O Hruszkewycz; M Allain; M V Holt; C E Murray; J R Holt; P H Fuoss; V Chamard
Journal:  Nat Mater       Date:  2016-11-21       Impact factor: 43.841

7.  Lateral position correction in ptychography using the gradient of intensity patterns.

Authors:  Priya Dwivedi; A P Konijnenberg; S F Pereira; H P Urbach
Journal:  Ultramicroscopy       Date:  2018-04-14       Impact factor: 2.689

8.  Ptychographic transmission microscopy in three dimensions using a multi-slice approach.

Authors:  A M Maiden; M J Humphry; J M Rodenburg
Journal:  J Opt Soc Am A Opt Image Sci Vis       Date:  2012-08-01       Impact factor: 2.129

9.  High-resolution three-dimensional partially coherent diffraction imaging.

Authors:  J N Clark; X Huang; R Harder; I K Robinson
Journal:  Nat Commun       Date:  2012       Impact factor: 14.919

10.  Near-field ptychography: phase retrieval for inline holography using a structured illumination.

Authors:  Marco Stockmar; Peter Cloetens; Irene Zanette; Bjoern Enders; Martin Dierolf; Franz Pfeiffer; Pierre Thibault
Journal:  Sci Rep       Date:  2013       Impact factor: 4.379

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  3 in total

1.  Efficient ptychographic phase retrieval via a matrix-free Levenberg-Marquardt algorithm.

Authors:  Saugat Kandel; S Maddali; Youssef S G Nashed; Stephan O Hruszkewycz; Chris Jacobsen; Marc Allain
Journal:  Opt Express       Date:  2021-07-19       Impact factor: 3.833

2.  Adorym: a multi-platform generic X-ray image reconstruction framework based on automatic differentiation.

Authors:  Ming Du; Saugat Kandel; Junjing Deng; Xiaojing Huang; Arnaud Demortiere; Tuan Tu Nguyen; Remi Tucoulou; Vincent De Andrade; Qiaoling Jin; Chris Jacobsen
Journal:  Opt Express       Date:  2021-03-29       Impact factor: 3.894

3.  Three dimensions, two microscopes, one code: Automatic differentiation for x-ray nanotomography beyond the depth of focus limit.

Authors:  Ming Du; Youssef S G Nashed; Saugat Kandel; Doğa Gürsoy; Chris Jacobsen
Journal:  Sci Adv       Date:  2020-03-27       Impact factor: 14.136

  3 in total

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