Literature DB >> 31250311

RNA Interference-Mediated Inhibition of ESCRT in Mammalian Cells.

Katherine Bowers1.   

Abstract

Specific depletion of proteins from cultured cells using RNA interference (RNAi) has been a useful technique in assessing protein function for many years. RNAi allows the degradation of specific, targeted mRNA, allowing the effects of protein depletion on cellular processes to be examined. Here, I present a protocol for the depletion of proteins from cultured HeLa cells and list specific reagents and considerations for targeting the endosomal sorting complexes required for transport (ESCRT).

Entities:  

Keywords:  ESCRT; Endosomes; Protein depletion; RNAi; siRNA

Mesh:

Substances:

Year:  2019        PMID: 31250311     DOI: 10.1007/978-1-4939-9492-2_22

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  23 in total

1.  Molecular basis for target RNA recognition and cleavage by human RISC.

Authors:  Stefan Ludwig Ameres; Javier Martinez; Renée Schroeder
Journal:  Cell       Date:  2007-07-13       Impact factor: 41.582

2.  Argonaute2 cleaves the anti-guide strand of siRNA during RISC activation.

Authors:  Tim A Rand; Sean Petersen; Fenghe Du; Xiaodong Wang
Journal:  Cell       Date:  2005-11-03       Impact factor: 41.582

3.  Passenger-strand cleavage facilitates assembly of siRNA into Ago2-containing RNAi enzyme complexes.

Authors:  Christian Matranga; Yukihide Tomari; Chanseok Shin; David P Bartel; Phillip D Zamore
Journal:  Cell       Date:  2005-11-03       Impact factor: 41.582

4.  Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells.

Authors:  S M Elbashir; J Harborth; W Lendeckel; A Yalcin; K Weber; T Tuschl
Journal:  Nature       Date:  2001-05-24       Impact factor: 49.962

5.  The sodium/proton exchanger NHE8 regulates late endosomal morphology and function.

Authors:  Scott P Lawrence; Nicholas A Bright; J Paul Luzio; Katherine Bowers
Journal:  Mol Biol Cell       Date:  2010-08-18       Impact factor: 4.138

6.  Biochemical identification of Argonaute 2 as the sole protein required for RNA-induced silencing complex activity.

Authors:  Tim A Rand; Krzysztof Ginalski; Nick V Grishin; Xiaodong Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2004-09-27       Impact factor: 11.205

7.  Degradation of endocytosed epidermal growth factor and virally ubiquitinated major histocompatibility complex class I is independent of mammalian ESCRTII.

Authors:  Katherine Bowers; Siân C Piper; Melissa A Edeling; Sally R Gray; David J Owen; Paul J Lehner; J Paul Luzio
Journal:  J Biol Chem       Date:  2005-12-20       Impact factor: 5.157

8.  A non-canonical ESCRT pathway, including histidine domain phosphotyrosine phosphatase (HD-PTP), is used for down-regulation of virally ubiquitinated MHC class I.

Authors:  Michael D J Parkinson; Siân C Piper; Nicholas A Bright; Jennifer L Evans; Jessica M Boname; Katherine Bowers; Paul J Lehner; J Paul Luzio
Journal:  Biochem J       Date:  2015-07-28       Impact factor: 3.857

Review 9.  Knocking down barriers: advances in siRNA delivery.

Authors:  Kathryn A Whitehead; Robert Langer; Daniel G Anderson
Journal:  Nat Rev Drug Discov       Date:  2009-02       Impact factor: 84.694

10.  Evidence that the endosomal sorting complex required for transport-II (ESCRT-II) is required for efficient human immunodeficiency virus-1 (HIV-1) production.

Authors:  Bo Meng; Natasha C Y Ip; Liam J Prestwood; Truus E M Abbink; Andrew M L Lever
Journal:  Retrovirology       Date:  2015-08-14       Impact factor: 4.602

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  1 in total

Review 1.  Recent advances in development of nano-carriers for immunogene therapy in various complex disorders.

Authors:  Sanaz Shahgordi; Fatemeh Oroojalian; Ezzat Hashemi; Maryam Hashemi
Journal:  Iran J Basic Med Sci       Date:  2022-02       Impact factor: 2.532

  1 in total

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