| Literature DB >> 31245769 |
Anna Brestovitsky1,2,3, Daphne Ezer2,3.
Abstract
Plants modulate their growth rates based on the environmental signals; however, it is difficult to experimentally test how natural temperature and light fluctuations affect growth, since realistic outdoor environments are difficult to replicate in controlled laboratory conditions, and it is expensive to conduct experiments in many environmentally diverse regions. In partnership with BBC Terrific Scientific, over 50 primary schools from around the UK grew spring onions outside of hydroponic growth chambers that they constructed. Over 2 weeks, students measured the height of the spring onions daily, while the hourly temperature and visibility data were determined for each school based on the UK Meteorological Office data. This rich time series data allowed us to model how plants integrate temperature and light signals to determine how much to grow, using techniques from functional data analysis. We determined that under nutrient-poor hydroponic conditions, growth of spring onion is sensitive to even a few degrees change in temperature, and is most correlated with warm nighttime temperatures, high temperatures at the start of the experiment, and light exposure near the end of the experiment. We show that scientists can leverage schools to conduct experiments that leverage natural environmental variability to develop complex models of plant-environment interactions.Entities:
Keywords: citizen science; functional regression; mass participatory experiment; onion; spring onion; temperature; time series
Year: 2019 PMID: 31245769 PMCID: PMC6508787 DOI: 10.1002/pld3.126
Source DB: PubMed Journal: Plant Direct ISSN: 2475-4455
Figure 1Set‐up of mass participation science experiment. (a) Students set‐up the growth controlled growth chambers for their spring onions from readily available materials. The goal of the project was to develop a model to predict the height of the spring onion using temperature and visibility measurements over time. (b) This map indicates the distribution of the UK weather stations and participating schools. (c) These histograms demonstrate the variability in average temperature, average visibility, and average spring onion height across the schools
Figure 2Functional regression of spring onion growth. (a) The heights spring onion measured by each student are shown in relation to the average temperature and average visibility observed at each school. (b) Each school (represented by each line) has a varied temperature and visibility profile over time. This shows the average temperature and visibility at each our of the day (top) and over the complete 2‐week experiment (bottom). (c) These are the results of the model that was most predictive of spring onion heights. (d) The form of the function and the associated weights are shown here. In this model, x 1(t) corresponds to the average temperature at the time t during the day, and x 2(t) corresponds to visibility at time t over the 2 weeks
Figure 3Fully functional regression suggests memory of early temperatures. (a) Suppose that there are two schools—one with an early burst of temperature and another with a late burst of temperature (i). One could imagine a growth spurt near the time where the temperature was elevated or one could image that the early temperature would affect the rate of growth throughout the 2‐week period. These types of patterns can be observed by looking at the weight matrix of a fully functional regression model (ii). In the heatmap illustrating the beta‐weights, the x‐axis represents the time in relation to the growth rate and the y‐axis represents the time in relation to the temperature. This forms a triangle, because temperatures at previous time points are potentially able to influence future growth rates, but the reverse is not true. (b) Qualitatively, the growth curves for the spring onions suggest near‐constant growth rates throughout the time course. (c) The fully functional model confirms that early temperatures are important in determining the growth rate for the entire time course
Figure 4Experimental outcomes. (a) Primary school students produce a distribution of spring onion circumferences that is similar to the one measured by the authors. (b) An experimental set‐up was designed to help distinguish between a number of alternative hypotheses. The model based on the primary school data predicts the latter hypothesis. (c) The experimental results confirm the model