Literature DB >> 31244008

Cell-Surface-Anchored Ratiometric DNA Nanoswitch for Extracellular ATP Imaging.

Jing Yuan1, Zhiwei Deng1, Hui Liu1, Xiufang Li1, Jianbing Li1, Yao He1, Zhihe Qing2, Yanjing Yang1, Shian Zhong1.   

Abstract

The precise detection of extracellular ATP, although a challenging task, is of great significance for understanding the related cell processes. Herein, we developed a ratiometric DNA nanoswitch by employing a DNA tweezer and split aptamer. The nanoswitch is composed of three specially designed ssDNA strands, namely, the central strands O1, O2, and O3. This nanoswitch can be anchored on the cell membrane by cholesterol labeled at the 3' end of O3. Initially, the DNA tweezer adopts an open state, separating the dual fluorophores and giving rise to a low FRET (fluorescence resonance energy transfer) ratio. The presence of ATP induces the binding of the two split aptamers to alter the structure of the nanoswitch from the open state to the closed state, bringing the donor and the acceptor closer together and generating high FRET efficiency. The results demonstrated that the ratiometric DNA nanoswitch can be applied for quantitative analysis and real-time monitoring of the changes in extracellular ATP. We believe that the cell surface-anchored DNA nanoswitch has promising prospects for use as a powerful tool for the understanding of different ATP-related physiological activities.

Entities:  

Keywords:  ATP; DNA nanoswitch; cholesterol; extracellular detection; ratiometric; split aptamer

Year:  2019        PMID: 31244008     DOI: 10.1021/acssensors.9b00482

Source DB:  PubMed          Journal:  ACS Sens        ISSN: 2379-3694            Impact factor:   7.711


  2 in total

1.  Ex vivo and in vivo fluorescence detection and imaging of adenosine triphosphate.

Authors:  Binbin Chu; Ajun Wang; Liang Cheng; Runzhi Chen; Huayi Shi; Bin Song; Fenglin Dong; Houyu Wang; Yao He
Journal:  J Nanobiotechnology       Date:  2021-06-22       Impact factor: 10.435

2.  Asymmetric patterning drives the folding of a tripodal DNA nanotweezer.

Authors:  Daniel Saliba; Tuan Trinh; Christophe Lachance-Brais; Alexander L Prinzen; Felix J Rizzuto; Donatien de Rochambeau; Hanadi F Sleiman
Journal:  Chem Sci       Date:  2021-11-16       Impact factor: 9.825

  2 in total

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