Literature DB >> 31240868

Whole Genome Sequencing of Single Circulating Tumor Cells Isolated by Applying a Pulsed Laser to Cell-Capturing Microstructures.

Okju Kim1, Daewon Lee2,3, Amos Chungwon Lee2, Yongju Lee1, Hyung Jong Bae4, Han-Byoel Lee5, Ryong Nam Kim5,6,7, Wonshik Han5,7, Sunghoon Kwon1,8,9.   

Abstract

Single cell analysis of heterogeneous circulating tumor cells (CTCs), by which the genomic profiles of rare single CTCs are connected to the clinical status of cancer patients, is crucial for understanding cancer metastasis and the clinical impact on patients. However, the heterogeneity in genotypes and phenotypes and rarity of CTCs have limited extensive single CTC genome research, further hindering clinical investigation. Despite recent efforts to build platforms that separate CTCs, the investigation on CTCs is difficult due to the lack of a retrieval process at the single cell level. In this study, laser-induced isolation of microstructures on an optomechanically-transferrable-chip and sequencing (LIMO-seq) is applied for whole genome sequencing of single CTCs. Also, the whole genome sequences and the molecular profiles of the isolated single cells from the whole blood of a breast cancer patient are analyzed.
© 2019 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  circulating tumor cells; genomics; laser ablation; next generation sequencing; single cell

Year:  2019        PMID: 31240868     DOI: 10.1002/smll.201902607

Source DB:  PubMed          Journal:  Small        ISSN: 1613-6810            Impact factor:   13.281


  4 in total

1.  Spatial epitranscriptomics reveals A-to-I editome specific to cancer stem cell microniches.

Authors:  Amos C Lee; Yongju Lee; Ahyoun Choi; Han-Byoel Lee; Kyoungseob Shin; Hyunho Lee; Ji Young Kim; Han Suk Ryu; Hoe Suk Kim; Seung Yeon Ryu; Sangeun Lee; Jong-Ho Cheun; Duck Kyun Yoo; Sumin Lee; Hansol Choi; Taehoon Ryu; Huiran Yeom; Namphil Kim; Jinsung Noh; Yonghee Lee; Inyoung Kim; Sangwook Bae; Jinhyun Kim; Wooseok Lee; Okju Kim; Yushin Jung; Changhoe Kim; Seo Woo Song; Yeongjae Choi; Junho Chung; Byung Gee Kim; Wonshik Han; Sunghoon Kwon
Journal:  Nat Commun       Date:  2022-05-09       Impact factor: 17.694

Review 2.  Nanomaterial-Based Immunocapture Platforms for the Recognition, Isolation, and Detection of Circulating Tumor Cells.

Authors:  Yichao Liu; Rui Li; Lingling Zhang; Shishang Guo
Journal:  Front Bioeng Biotechnol       Date:  2022-03-14

Review 3.  Dive into Single, Seek Out Multiple: Probing Cancer Metastases via Single-Cell Sequencing and Imaging Techniques.

Authors:  Shang Su; Xiaohong Li
Journal:  Cancers (Basel)       Date:  2021-03-03       Impact factor: 6.639

Review 4.  Recent Advances in Polymer Additive Engineering for Diagnostic and Therapeutic Hydrogels.

Authors:  Sang-Wook Bae; Jiyun Kim; Sunghoon Kwon
Journal:  Int J Mol Sci       Date:  2022-03-09       Impact factor: 5.923

  4 in total

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