| Literature DB >> 31239729 |
Elnaz Abbasi1,2, Hamid Abtahi3, Alex van Belkum4, Ehsanollah Ghaznavi-Rad1,3.
Abstract
Background: Shigella spp. are primary pathogens of diarrhea in children worldwide. Emergence of resistance to fluoroquinolones and third-generation cephalosporins is crucial in the management of pediatric shigellosis. We determined the prevalence and the antibiotic resistance patterns of Shigella species isolated from pediatric patients in central Iran. Materials and methods: Pediatric diarrhea samples (n=230) were cultured on MacConkey and XLD agar media and in GN broth. Genus-specific PCR for ipaH was also used for detection directly from fecal specimens. Antibiotic resistance and the frequency of ESBL and AmpC genes were determined.Entities:
Keywords: Iran; MDR; Shigella; antibiotic resistance; dysentery; integrons
Year: 2019 PMID: 31239729 PMCID: PMC6559769 DOI: 10.2147/IDR.S203654
Source DB: PubMed Journal: Infect Drug Resist ISSN: 1178-6973 Impact factor: 4.003
Classification of age groups and clinical symptoms of pediatric patients infected by Shigellaspp
| Age grouping | Gender | Mucus in the stool | Blood in the stool | Abdominal pain/Tenesmus | Fever | Vomiting | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1–2 | Male | 1 | 2 | 1 | 2 | 1 | 2 | 1 | 2 | 0 | 2 | 0 | 0 |
| Female | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | |
| Total: | 1/4, 25% | 3/15, 20% | 1/1, 100% | 3/3, 100% | 1/1, 100% | 3/3, 100% | 1/1, 100% | 3/3, 100% | 0% | 2/3, 66.6% | 0% | 0% | |
| 3–4 | Male | 0 | 2 | 0 | 2 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| Female | 0 | 2 | 0 | 2 | 0 | 2 | 0 | 2 | 0 | 2 | 0 | 0 | |
| Total: | 0% | 4/15, 26.6% | 0% | 4/4, 100% | 0% | 3/4, 75% | 0% | 3/4, 75% | 0% | 2/4, 50% | 0% | 0% | |
| 5–10 | Male | 1 | 2 | 1 | 2 | 1 | 2 | 1 | 2 | 1 | 0 | 0 | 0 |
| Female | 1 | 3 | 1 | 3 | 1 | 3 | 1 | 3 | 0 | 3 | 0 | 1 | |
| Total: | 2/4, 50% | 5/15, 33.3% | 2/2, 100% | 5/5. 100% | 2/2, 100% | 5/5, 100% | 2/2, 100% | 5/5, 100% | 1/2, 50% | 3/5, 60% | 0% | 1/5, 20% | |
| 10˃ | Male | 0 | 2 | 0 | 2 | 0 | 2 | 0 | 2 | 0 | 2 | 0 | 1 |
| Female | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | |
| Total: | 1/4, 25% | 3/15, 20% | 1/1, 100% | 3/3, 100% | 1/1, 100% | 3/3, 100% | 1/1, 100% | 3/3, 100% | 1/1, 100% | 2/3, 66.6% | 0% | 1/3, 33.3% | |
| Final total | 4/19, 21% | 15/19, 78.9% | 4/4, 100% | 15/15, 100% | 4/4, 100% | 14/15, 93.3% | 4/4, 100% | 14/15, 93.3% | 2/4, 50% | 9/15, 60% | 0% | 2/15, 13.3% | |
Frequency of antibiotic resistance among Shigella isolates
| Antibiotic | |||
|---|---|---|---|
| Cotrimoxazole | 19 (100%) | 15 (100%) | 4 (100%) |
| Ampicillin | 16 (84.2%) | 12 (80%) | 4 (100%) |
| Cefixime | 13 (68.4%) | 11 (73.3%) | 2 (50%) |
| Cefotaxime | 12 (63.1%) | 11 (73.3%) | 1 (25%) |
| Ceftriaxone | 12 (63.1%) | 11 (73.3%) | 1 (25%) |
| Ceftazidime | 6 (31.5%) | 6 (40%) | 0% |
| Ceftizoxime | 4 (21%) | 4 (26.6%) | 0% |
| Cefoxitin | 3 (15.7%) | 2 (13.3%) | 1 (25%) |
| Tetracycline | 7 (36.8%) | 4 (26.6%) | 3 (75%) |
| Gentamicin | 7 (36.8%) | 6 (40%) | 1 (25%) |
| Chloramphenicol | 2 (10.5%) | 0(0%) | 2 (50%) |
| Nalidixic acid | 5 (26.3%) | 4 (26.6%) | 1 (25%) |
| Ciprofloxacin | 2 (10.5%) | 2(13.3%) | 0% |
| Norfloxacin | 1 (5.2%) | 1 (6.6%) | 0% |
| Azitromycine | 0% | 0% | 0% |
| Imipenem | 0% | 0% | 0% |
| ESBL | 10 (52.6%) | 9 (90%) | 1 (10%) |
| AmpC | 3 (15.8%) | 2 (66.6%) | 1 (33.3%) |
| MDR | 17 (89.4%) | 13 (86.6%) | 4 (100%) |
Frequency of antibiotic resistance genes among Shigella isolates
| Resistance | Target gene | Frequency of resistance genes in | Frequency of resistance genes in | Frequency of resistance genes in |
|---|---|---|---|---|
| Shiga toxin | 0% | 0% | 0% | |
| 19 (100%) | 15 (100%) | 4 (100%) | ||
| ESBL+, n=10 | 10 (100%) | 9 (100%) | 1 (100%) | |
| 10 (100%) | 9 (100%) | 1 (100%) | ||
| 10 (100%) | 9 (100%) | 1 (100%) | ||
| 9 (90%) | 9 (100%) | 0% | ||
| 1 (10%) | 1 (11.1%) | 0% | ||
| 1 (10%) | 1 (11.1%) | 0% | ||
| 0% | 0% | 0% | ||
| AmpC+, n=3 | 3 (100%) | 2 (100%) | 1 (100%) | |
| 2 (66.6%) | 2 (100%) | 0% | ||
| 1 (33.3%) | 1 (100%) | 0% | ||
| 0% | 0% | 0% | ||
| 0% | 0% | 0% | ||
| 0% | 0% | 0% | ||
| Fluoroquinolone, n=5 | 5 (100%) | 4 (100%) | 1 (100%) | |
| 5 (100%) | 4 (100%) | 1 (100%) | ||
| 3 (60%) | 2 (50%) | 1 (100%) | ||
| 0% | 0% | 0% | ||
| 0% | 0% | 0% | ||
| Integrase, n=19 | 18 (94.7%) | 14 (93.3%) | 4 (100%) | |
| 19 (100%) | 15 (100%) | 4 (100%) | ||
| 0% | 0% | 0% | ||
| Quaternary ammonium compounds, n=19 | 9 (47.3%) | 8 (53.3%) | 1 (25%) |
Phenotypic and genotypic antibiotic resistance rates in Shigella spp
| Antibiotic | Resistance | Target | Frequency of resistance genes | Resistance | Target | Frequency of resistance genes | |||
|---|---|---|---|---|---|---|---|---|---|
| Cotrimoxazole | 19 (100%) | 15 (100%) | 4 (100%) | Sulfonamide | 0 (0%) | ||||
| 19 (100%) | |||||||||
| Ampicillin | 16 (84.2%) | 12 (80%) | 4 (100%) | ||||||
| Cefixime | 13 (68.4%) | 11 (73.3%) | 2 (50%) | ESBL+ | 10 (100%) | AmpC+ | 3 (100%) | ||
| Cefotaxime | 12 (63.1%) | 11 (73.3%) | 1 (25%) | 10 (100%) | 2 (66.6%) | ||||
| Ceftriaxone | 12 (63.1%) | 11 (73.3%) | 1 (25%) | 10 (100%) | 1 (33.3%) | ||||
| Ceftazidime | 6 (31.5%) | 6 (40%) | 0% | 9 (90%) | 0% | ||||
| Ceftizoxime | 4 (21%) | 4 (26.6%) | 0% | 1 (10%) | 0% | ||||
| Cefoxitin | 3 (15.7%) | 2 (13.3%) | 1 (25%) | 1 (10%) | 0% | ||||
| 0% | |||||||||
| Tetracycline | 7 (36.8%) | 4 (26.6%) | 3 (75%) | ||||||
| Gentamicin | 7 (36.8%) | 6 (40%) | 1 (25%) | ||||||
| Chloramphenicol | 2 (10.5%) | 0(0%) | 2 (50%) | ||||||
| Nalidixic acid | 5 (26.3%) | 4 (26.6%) | 1 (25%) | 5 (100%) | |||||
| Ciprofloxacin | 2 (10.5%) | 2(13.3%) | 0% | 5 (100%) | |||||
| Norfloxacin | 1 (5.2%) | 1 (6.6%) | 0% | 3 (60%) | |||||
| 0% | |||||||||
| 0% | |||||||||
| Azitromycine | 0% | 0% | 0% | ||||||
| Imipenem | 0% | 0% | 0% | ||||||
| 14 (93.3%) | 3 (75%) | Integrase | 17 (94.7%) | ||||||
| 15 (100%) | 4 (100%) | 19 (100%) | |||||||
| 0% | 0% | 0% | |||||||
| 8 (53.3%) | 1 (25%) | Quaternary ammonium compounds | 9 (47.3%) | ||||||
| MDR | 17 (89.4%) | 13 (86.6%) | 4 (100%) |