Literature DB >> 31238177

Clinical and Immunological Implications of Frameshift Mutations in Lung Cancer.

Young Kwang Chae1, Pedro Viveiros1, Gilberto Lopes2, Bhoomika Sukhadia3, Muhammad Mubbashir Sheikh3, Diana Saravia2, Vaia Florou2, Ethan S Sokol4, Garrett M Frampton4, Zachary R Chalmers5, Siraj M Ali4, Jeffrey S Ross4, Sangmin Chang3, Si Wang3, Lauren Chiec3, Ashkon Rahbari3, Nisha Mohindra1, Victoria Villaflor1, Sang Ha Shin3, Michael Oh3, Jonathan Anker3, Lee Chun Park3, Victor Wang6, Jeffrey Chuang6, Wungki Park7.   

Abstract

INTRODUCTION: Presently, programmed death ligand 1 is the most commonly used biomarker to predict response to immune checkpoint inhibitors (ICIs) in NSCLC. Owing to its several limitations, there is continuous search for more precise and reliable markers. Frameshift mutations by insertion or deletion (fsindels) are suggested to induce more immunogenic tumor-specific neoantigens, conferring better response to ICIs. Positive correlation of fsindels with ICI response has been studied in melanoma and renal cell carcinoma. We investigated the implication of fsindels in the clinical outcomes and immune landscape of patients with NSCLC treated with ICIs.
METHODS: We utilized The Cancer Genome Atlas data set to analyze tumor mutational burden, neoantigen burden, and immune landscape in relation to fsindel status. In addition, utilizing the clinical data from 122 patients treated with ICIs, we evaluated the influence of fsindels on disease response rates and survival outcomes.
RESULTS: A positive correlation between fsindel burden and tumor mutational burden and activated CD4/CD8 T-cell infiltration was shown. Presence of fsindels was also associated with significant prolongation of progression-free survival in patients treated with ICIs (median 6.2 versus 2.7 months [p = 0.01]). In addition, significant differences in the overall response rates (26% versus 12% [p = 0.04]) and disease control rates (68% versus 48% [p = 0.02]) were observed in patients with fsindels.
CONCLUSION: Our findings suggest that fsindels may have a predictive role for ICI response in NSCLC.
Copyright © 2019 International Association for the Study of Lung Cancer. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Biomarker; Frameshift; Genetics; Immunotherapy; Non–small cell lung cancer

Year:  2019        PMID: 31238177     DOI: 10.1016/j.jtho.2019.06.016

Source DB:  PubMed          Journal:  J Thorac Oncol        ISSN: 1556-0864            Impact factor:   15.609


  11 in total

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Review 10.  Predictive Markers for Immune Checkpoint Inhibitors in Non-Small Cell Lung Cancer.

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Journal:  J Clin Med       Date:  2022-03-27       Impact factor: 4.241

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