| Literature DB >> 31237836 |
Kazuma Okada, Ryo Morita, Kazutaka Egawa, Yuki Hirai, Atsushi Kaida, Michinori Shirano, Hideyuki Kubo, Tetsushi Goto, Seiji P Yamamoto.
Abstract
The largest outbreak of dengue fever in Tanzania is ongoing. Dengue virus type 1 was diagnosed in a traveler who returned from Tanzania to Japan. In phylogenetic analysis, the detected strain was close to the Singapore 2015 strain, providing a valuable clue for investigating the dengue outbreak in Tanzania.Entities:
Keywords: Japan; Tanzania; Tanzania dengue; dengue virus 1; type 1; viruses
Mesh:
Year: 2019 PMID: 31237836 PMCID: PMC6711223 DOI: 10.3201/eid2509.190814
Source DB: PubMed Journal: Emerg Infect Dis ISSN: 1080-6040 Impact factor: 6.883
FigureMaximum-likelihood phylogram of the envelope gene (1,485 nt) of dengue virus type 1 strains detected in Osaka, Japan, 2019 (arrow), Africa (black squares), and reference strains. Based on Bayesian information criteria, the Tamura-Nei plus gamma model was used to construct the phylogram. Numbers at the nodes indicate the bootstrap support values, which are expressed as a percentage of 1,000 replicates (values <80% are omitted). Each strain is identified by strain name, 2-letter country name abbreviation (country exported from/to, in the case of travelers), and detection year; accession numbers are shown in parentheses. Genotype I–IV branches are condensed for space. Scale bar indicates genetic distance (nucleotide substitutions per site). AO, Angola; BD, Bangladesh; CD, Democratic Republic of the Congo; CI, Côte d'Ivoire; GA, Gabon; IN, India; JP, Japan; KM, Comoros; NG, Nigeria; SG, Singapore; TW, Taiwan; TZ, Tanzania.