Literature DB >> 31235774

The extent of DNA methylation anticipation due to a genetic defect in ICR1 in Beckwith-Wiedemann syndrome.

Feifei Sun1,2, Ken Higashimoto3, Atsuko Awaji4, Kenji Ohishi4, Naoto Nishizaki4, Yuka Tanoue1, Saori Aoki1, Hidetaka Watanabe1, Hitomi Yatsuki1, Hidenobu Soejima5.   

Abstract

Beckwith-Wiedemann syndrome (BWS) is a representative imprinting disorder. Gain of methylation at imprinting control region 1 (ICR1-GOM), leading to the biallelic expression of IGF2 and silencing of H19, is one of the causative alterations in BWS. Twenty percent of BWS patients with ICR1-GOM have genetic defects in ICR1. Evidence of methylation anticipation in familial BWS patients with ICR1 genetic defects has been reported. However, the precise methylation pattern and extent of anticipation in these patients remain elusive. In addition, although age-related IGF2-DMR0 hypomethylation has been reported in the normal population, the period of its occurrence is unknown. In this study, we analyzed 10 sites (IGF2-DMR0, IGF2-DMR2, CTCF binding sites 1-7, and the H19 promoter) within the IGF2/H19 domain in familial BWS patients harboring a pathogenic variant in ICR1. We found that sites near the variant had relatively higher methylation in the first affected generation and observed methylation anticipation through maternal transmission in the next generation. The extent of anticipation was greater at sites far from the variant than nearby sites. The extended and severe GOM might be due to the insufficient erasure/demethylation of pre-acquired ICR1-GOM in primordial germ cells or during the preimplantation stage. In the normal population, age-related IGF2-DMR0 hypomethylation occurred; it became established by young adulthood and continued to old age. Further studies are needed to clarify (1) the precise mechanism of anticipation in patients with familial BWS and (2) the mechanism and biological significance of constitutive hypomethylation of IGF2-DMR0 and/or other imprinted differentially methylated regions.

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Year:  2019        PMID: 31235774     DOI: 10.1038/s10038-019-0634-0

Source DB:  PubMed          Journal:  J Hum Genet        ISSN: 1434-5161            Impact factor:   3.172


  31 in total

1.  Assisted Reproductive Techniques and Risk of Beckwith-Wiedemann Syndrome.

Authors:  Alessandro Mussa; Cristina Molinatto; Flavia Cerrato; Orazio Palumbo; Massimo Carella; Giuseppina Baldassarre; Diana Carli; Clementina Peris; Andrea Riccio; Giovanni Battista Ferrero
Journal:  Pediatrics       Date:  2017-06-20       Impact factor: 7.124

2.  Clinical utility gene card for: Beckwith-Wiedemann Syndrome.

Authors:  Thomas Eggermann; Elizabeth Algar; Pablo Lapunzina; Deborah Mackay; Eamonn R Maher; Marcel Mannens; Irène Netchine; Dirk Prawitt; Andrea Riccio; I Karen Temple; Rosanna Weksberg
Journal:  Eur J Hum Genet       Date:  2013-07-03       Impact factor: 4.246

Review 3.  CTCF function is modulated by neighboring DNA binding factors.

Authors:  Oliver Weth; Rainer Renkawitz
Journal:  Biochem Cell Biol       Date:  2011-09-07       Impact factor: 3.626

Review 4.  A systematic review and meta-analysis of DNA methylation levels and imprinting disorders in children conceived by IVF/ICSI compared with children conceived spontaneously.

Authors:  Gabija Lazaraviciute; Miriam Kauser; Sohinee Bhattacharya; Paul Haggarty; Siladitya Bhattacharya
Journal:  Hum Reprod Update       Date:  2014-06-24       Impact factor: 15.610

5.  Loss of imprinting in colorectal cancer linked to hypomethylation of H19 and IGF2.

Authors:  Hengmi Cui; Patrick Onyango; Sheri Brandenburg; Yiqian Wu; Chih-Lin Hsieh; Andrew P Feinberg
Journal:  Cancer Res       Date:  2002-11-15       Impact factor: 12.701

6.  A dyad oct-binding sequence functions as a maintenance sequence for the unmethylated state within the H19/Igf2-imprinted control region.

Authors:  Naohiro Hori; Hiroshi Nakano; Toshiyuki Takeuchi; Hiroyuki Kato; Sayuri Hamaguchi; Mitsuo Oshimura; Kenzo Sato
Journal:  J Biol Chem       Date:  2002-05-23       Impact factor: 5.157

7.  Analysis of the IGF2/H19 imprinting control region uncovers new genetic defects, including mutations of OCT-binding sequences, in patients with 11p15 fetal growth disorders.

Authors:  Julie Demars; Mansur Ennuri Shmela; Sylvie Rossignol; Jun Okabe; Irène Netchine; Salah Azzi; Sylvie Cabrol; Cédric Le Caignec; Albert David; Yves Le Bouc; Assam El-Osta; Christine Gicquel
Journal:  Hum Mol Genet       Date:  2009-12-09       Impact factor: 6.150

8.  A novel de novo point mutation of the OCT-binding site in the IGF2/H19-imprinting control region in a Beckwith-Wiedemann syndrome patient.

Authors:  K Higashimoto; K Jozaki; T Kosho; K Matsubara; T Fuke; D Yamada; H Yatsuki; T Maeda; Y Ohtsuka; K Nishioka; K Joh; H Koseki; T Ogata; H Soejima
Journal:  Clin Genet       Date:  2013-12-04       Impact factor: 4.438

9.  Prevalence of Beckwith-Wiedemann syndrome in North West of Italy.

Authors:  Alessandro Mussa; Silvia Russo; Agostina De Crescenzo; Nicoletta Chiesa; Cristina Molinatto; Angelo Selicorni; Lorenzo Richiardi; Lidia Larizza; Margherita Cirillo Silengo; Andrea Riccio; Giovanni Battista Ferrero
Journal:  Am J Med Genet A       Date:  2013-08-05       Impact factor: 2.802

10.  Somatically acquired hypomethylation of IGF2 in breast and colorectal cancer.

Authors:  Yoko Ito; Thibaud Koessler; Ashraf E K Ibrahim; Sushma Rai; Sarah L Vowler; Sayeda Abu-Amero; Ana-Luisa Silva; Ana-Teresa Maia; Joanna E Huddleston; Santiago Uribe-Lewis; Kathryn Woodfine; Maja Jagodic; Raffaella Nativio; Alison Dunning; Gudrun Moore; Elena Klenova; Sheila Bingham; Paul D P Pharoah; James D Brenton; Stephan Beck; Manjinder S Sandhu; Adele Murrell
Journal:  Hum Mol Genet       Date:  2008-06-09       Impact factor: 6.150

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  2 in total

1.  Hypomethylation of a centromeric block of ICR1 is sufficient to cause Silver-Russell syndrome.

Authors:  Ken Higashimoto; Hijiri Watanabe; Yuka Tanoue; Hidefumi Tonoki; Tomoharu Tokutomi; Satoshi Hara; Hitomi Yatsuki; Hidenobu Soejima
Journal:  J Med Genet       Date:  2020-05-23       Impact factor: 6.318

2.  DNA methylation analysis of multiple imprinted DMRs in Sotos syndrome reveals IGF2-DMR0 as a DNA methylation-dependent, P0 promoter-specific enhancer.

Authors:  Hidetaka Watanabe; Ken Higashimoto; Noriko Miyake; Sumiyo Morita; Takuro Horii; Mika Kimura; Takayuki Suzuki; Toshiyuki Maeda; Hidenori Hidaka; Saori Aoki; Hitomi Yatsuki; Nobuhiko Okamoto; Tetsuji Uemura; Izuho Hatada; Naomichi Matsumoto; Hidenobu Soejima
Journal:  FASEB J       Date:  2019-11-28       Impact factor: 5.191

  2 in total

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