Literature DB >> 31233780

Immunoinformatics approaches for designing a novel multi epitope peptide vaccine against human norovirus (Norwalk virus).

Kazi Faizul Azim1, Mahmudul Hasan2, Md Nazmul Hossain3, Saneya Risa Somana4, Syeda Farjana Hoque4, Md Nazmul Islam Bappy4, Anjum Taiebah Chowdhury4, Tahera Lasker4.   

Abstract

Norovirus is known as a major cause of several acute gastroenteritis (AGE) outbreaks each year. A study was conducted to develop a unique multi epitope subunit vaccine against human norovirus by adopting reverse vaccinology approach. The entire viral proteome of Norwalk virus was retrieved and allowed for further in silico study to predict highly antigenic epitopes through antigenicity, transmembrane topology screening, allergenicity assessment, toxicity analysis, population coverage analysis and molecular docking approach. Capsid protein VP1 and protein VP2 were identified as most antigenic viral proteins which generated a plethora of antigenic epitopes. Physicochemical properties and secondary structure of the designed vaccine were assessed to ensure its thermostability, hydrophilicity, theoretical PI and structural behavior. Molecular docking analysis of the refined vaccine with different MHCs and human immune TLR8 receptor demonstrated higher binding interaction as well. Complexed structure of the modeled vaccine and TLR8 showed minimal deformability at molecular level. The designed construct was reverse transcribed and adapted for E. coli strain K12 prior to insertion within pET28a(+) vector for its heterologous cloning and expression, and sequence of vaccine constructs showed no similarity with human proteins. However, the study could initiate in vitro and in vivo studies regarding effective vaccine development against human norovirus.
Copyright © 2019 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Capsid protein VP1; Molecular docking; Norovirus; Protein VP2; Reverse vaccinology; TLR8 receptor

Mesh:

Substances:

Year:  2019        PMID: 31233780     DOI: 10.1016/j.meegid.2019.103936

Source DB:  PubMed          Journal:  Infect Genet Evol        ISSN: 1567-1348            Impact factor:   3.342


  8 in total

1.  Immunoinformatics and Biophysics Approaches to Design a Novel Multi-Epitopes Vaccine Design against Staphylococcus auricularis.

Authors:  Roba Attar; Eid A Alatawi; Faris F Aba Alkhayl; Khloud Nawaf Alharbi; Khaled S Allemailem; Ahmad Almatroudi
Journal:  Vaccines (Basel)       Date:  2022-04-19

2.  A cutting-edge immunoinformatics approach for design of multi-epitope oral vaccine against dreadful human malaria.

Authors:  Manisha Pritam; Garima Singh; Suchit Swaroop; Akhilesh Kumar Singh; Brijesh Pandey; Satarudra Prakash Singh
Journal:  Int J Biol Macromol       Date:  2020-04-29       Impact factor: 6.953

3.  Genome based evolutionary lineage of SARS-CoV-2 towards the development of novel chimeric vaccine.

Authors:  Mst Rubaiat Nazneen Akhand; Kazi Faizul Azim; Syeda Farjana Hoque; Mahmuda Akther Moli; Bijit Das Joy; Hafsa Akter; Ibrahim Khalil Afif; Nadim Ahmed; Mahmudul Hasan
Journal:  Infect Genet Evol       Date:  2020-09-01       Impact factor: 3.342

4.  A Multiepitope Peptide, rOmp22, Encapsulated in Chitosan-PLGA Nanoparticles as a Candidate Vaccine Against Acinetobacter baumannii Infection.

Authors:  Xingran Du; Jianpeng Xue; Mingzi Jiang; Shaoqing Lin; Yuzhen Huang; Kaili Deng; Lei Shu; Hanmei Xu; Zeqing Li; Jing Yao; Sixia Chen; Ziyan Shen; Ganzhu Feng
Journal:  Int J Nanomedicine       Date:  2021-03-04

5.  Implementation of in silico methods to predict common epitopes for vaccine development against Chikungunya and Mayaro viruses.

Authors:  Hammadul Hoque; Rahatul Islam; Srijon Ghosh; Md Mashiur Rahaman; Nurnabi Azad Jewel; Md Abunasar Miah
Journal:  Heliyon       Date:  2021-03-08

6.  In Silico Designing of a Multitope Vaccine against Rhizopus microsporus with Potential Activity against Other Mucormycosis Causing Fungi.

Authors:  Mohamed A Soltan; Muhammad Alaa Eldeen; Nada Elbassiouny; Hasnaa L Kamel; Kareem M Abdelraheem; Hanaa Abd El-Gayyed; Ahmed M Gouda; Mohammed F Sheha; Eman Fayad; Ola A Abu Ali; Khalid Abd El Ghany; Dalia A El-Damasy; Khaled M Darwish; Sameh S Elhady; Ashraf E Sileem
Journal:  Cells       Date:  2021-11-04       Impact factor: 6.600

7.  A Systematic Immuno-Informatic Approach to Design a Multiepitope-Based Vaccine Against Emerging Multiple Drug Resistant Serratia marcescens.

Authors:  Marcelo Silva Folhas Damas; Fernando Gabriel Mazur; Caio Cesar de Melo Freire; Anderson Ferreira da Cunha; Maria-Cristina da Silva Pranchevicius
Journal:  Front Immunol       Date:  2022-03-14       Impact factor: 7.561

8.  Combination of highly antigenic nucleoproteins to inaugurate a cross-reactive next generation vaccine candidate against Arenaviridae family.

Authors:  Kazi Faizul Azim; Tahera Lasker; Rahima Akter; Mantasha Mahmud Hia; Omar Faruk Bhuiyan; Mahmudul Hasan; Md Nazmul Hossain
Journal:  Heliyon       Date:  2021-05-19
  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.