| Literature DB >> 31233555 |
Barbara A Bensing1, Liang Li2, Olga Yakovenko3, Maurice Wong4, Karen N Barnard5, T M Iverson6, Carlito B Lebrilla4, Colin R Parrish5, Wendy E Thomas3, Yan Xiong2,7, Paul M Sullam1.
Abstract
Streptococcus gordonii aical">ndEntities:
Mesh:
Substances:
Year: 2019 PMID: 31233555 PMCID: PMC6611644 DOI: 10.1371/journal.ppat.1007896
Source DB: PubMed Journal: PLoS Pathog ISSN: 1553-7366 Impact factor: 6.823
Fig 1Comparison of the GspB, Hsa and 10712 BRs.
The upper diagram shows the general domain organization of the SRR glycoproteins. SP/AST, signal peptide and accessory Sec transport domain; BR, ligand binding region; CWA, cell wall anchor. The SRR1 and SRR2 regions undergo glycosylation in the bacterial cytoplasm, prior to transport by the accessory Sec system. The lower portion shows high-resolution crystal structures of the binding regions of GspB, Hsa and the SRR glycoprotein from the S. gordonii strain UB10712. The GspBBR structure was reported previously [30]. Partially refined structures of the HsaBR and 10712BR were provided by T. Iverson (manuscript submitted; PDB files 6EFC and 6EFF pending release). Note that the GenBank entry for the 10712BR sequence originally listed the source strain as Streptococcus mitis NCTC10712 (GenBank JYGN00000000) [66]. The S. gordonii SK12 BR sequence is identical to that of UB10712, and was obtained by translation of the publicly available partially assembled SK12 genome (NZ_LAWP01000015). The CnaA domain is found in some Siglec-like BRs but does not contribute to sialoglycan binding. The sialoglycan ligand preferences thus far appear to be dictated by the Siglec domains. The YTRY motif residues are shown as black sticks. The Unique domain may modulate the conformation of the Siglec domain.
Fig 2Ligand repertoires determined for three Siglec-like BRs.
The high affinity sialoglycan ligands for the recombinant BRs were determined by analysis on a custom sialoglycan array and by enzyme-linked assays [23, 26]. The O-glycan ligand preferences were determined by analyzing glycan profiles of affinity-captured plasma proteins [33]. Note that 10712BR was previously referred to as NCTC10712BR. Binding of strains M99 and DL1 to array glycans paralleled binding of the respective recombinant BRs [26]. Monosaccharide symbols follow the Symbol Nomenclature for Glycans system [67]. Neu5Ac, N-acetyl neuraminic acid; Gal, galactose; GalNAc, N-acetyl galactosamine; GlcNAc, N-acetyl glucosamine; Fuc, fucose. sTa, sialyl T-antigen; sLeC, sialyl Lewis C; 3'sLn, 3'sialyllactosamine; sLeX, sialyl Lewis X. Throughout the manuscript, 3'sLn is referred to simply as "sLn". The "core 1" and "core 2" designations refer to the protein-proximal glycan structures.
Fig 3Design of isogenic variant strains of S. gordonii M99.
Strains were designed to express GspB variants in which amino acid residues 248 to 604 of GspB (GenBank accession number AAL13053) were replaced with residues 242 to 448 of Hsa (ABV10391) or 241 to 446 of the SRR glycoprotein homolog from S. gordonii UB10712 (WP_045635027). A: Alignment of the BR domain junctions. Conserved amino acids are indicated in red type. T248 and S604 of GspB, A242 and Q448 of Hsa, and V241 and Q446 of the UB10712 homolog are underlined. B: Strategy to replace the GspB BR coding region in the native S. gordonii chromosomal locus. PS2114 is a derivative of S. gordonii M99 that has a deletion of gspB codons 1 to 486 and a cat gene in the upstream non-coding region [30]. Chimeric sequences were introduced into the S. gordonii chromosome via a strategy that involved recombination by double-crossover between gspB codons 605–703 and the upstream pdxU gene.
Fig 4Characteristics of the chimeric SRR glycoprotein S. gordonii strains.
A: The isogenic variant strains show growth rates similar to M99. Strains were grown for 17 h in Todd-Hewitt broth, then diluted 1:10 into fresh medium and incubated at 37°C for 23 h. B: The chimeric SRR glycoproteins display normal cell-surface expression levels and apparent molecular masses. Each lane contains cell wall proteins extracted from bacteria in 75 μl of stationary-phase cultures (roughly 75 x 106 CFU). Blots were probed with polyclonal antibodies that recognized the glycan moieties on GspB. C: Binding properties of the isogenic variant strains. Fixed human platelets or biotinylated glycans were immobilized in 96-well plates. Binding is reported as the mean ± standard deviation of the percent of input streptococci adherent after 90 min (n = 6). Asterisks indicate p<0.05.
Fig 5Relative virulence of S.gordonii M99 and the isogenic variant strains in two rat models of endocarditis.
Animals were infected with 105 CFU of each of a pair of strains (A and B; n = 7 and n = 6, respectively) or with 105 CFU of a single strain (C; n = 7 for M99, n = 6 for PS3515 and n = 7 for PS3516). The number of bacteria in aortic valve vegetations was assessed 72 h post-infection. Asterisks indicate p<0.05.
Competition model of endocarditis in rats, 72 h post-infection.
| Strains | Log10 CFU/g tissue (mean ± SD) | ||
|---|---|---|---|
| Vegetation | Kidney | Spleen | |
| M99 (n = 7) | 7.92 ± 1.04 | 3.12 ± 0.58 | 3.55 ± 1.04 |
| PS3515 (n = 7) | 8.25 ± 0.72 | 3.57 ± 1.10 | 3.92 ± 0.74 |
| M99 (n = 6) | 8.14 ± 1.39 | 2.99 ± 1.44 | 2.98 ± 1.42 |
| PS3516 (n = 6) | 7.52 ± 1.63 | 2.85 ± 1.23 | 2.73 ± 1.36 |
a data are also shown in Fig 5A and 5B
Single strain infection model of endocarditis in rats, 72 h post-infection.
| Strain | Log10 CFU/g tissue (mean ± SD) | Log10 CFU/ml (mean ± SD) | ||
|---|---|---|---|---|
| Vegetation | Kidney | Spleen | ||
| M99 (n = 7) | 8.33 ± 0.67 | 5.04 ± 0.72 | 3.62 ± 0.97 | 1.96 ± 0.92 |
| PS3515 (n = 6) | 8.73 ± 0.64 | 3.90 ± 0.53 | 3.53 ± 0.31 | 2.26 ± 0.48 |
| PS3516 (n = 7) | 6.83 ± 1.13 | 3.12 ± 1.02 | 3.44 ± 0.47 | 2.21 ± 1.13 |
a data are also shown in Fig 5C
b p<0.05 compared with both M99 and PS3515
c p<0.05 compared with both PS3515 and PS3516
Fig 6Initial colonization of mechanically-damaged aortic valves.
Animals were infected with 108 or 107 CFU of the indicated strain. At the 108 CFU inoculum, n = 7 for M99, and n = 6 for PS3515 and PS3516. For the 107 CFU inoculum, n = 8 for M99 and PS3516, and n = 7 for PS3515. Numbers of bacteria attached to aortic valve vegetations (A and B) or in the peripheral blood (C and D) were assessed 1 h post-infection. Asterisks indicate p<0.05.
Fig 7Binding of S. gordonii M99 and the isogenic variant strains to immobilized human or rat platelets under shear.
The gspB deletion strain PS846 has previously been used to assess GspB-dependent binding and virulence [15, 26, 30, 36, 49]. Suspensions of bacteria were washed through microfluidic chambers containing immobilized human (A) or rat (B) platelets, at flow rates corresponding to the indicated shear stresses, and adherent bacteria recorded using videomicroscopy and counted. To measure detachment from human (C) or rat (D) platelets, bacteria that initially bound at 1 dyne/cm2 were subjected to stepwise lower or higher flow rates, and the fraction of bacteria remaining bound at the indicated shear stresses were counted. Asterisks indicate p<0.05 compared with M99.
Fig 8Comparison of human and rat platelet GPIbα O-glycans.
A: Western and lectin blot analysis showing GPIbα as the major sialylated glycoprotein in the crude platelet extracts. Lanes contain 2 μl of the GPIbα preparations. Proteins were separated by electrophoresis on 3–8% polyacrylamide, transferred to nitrocellulose, and then probed as indicated. Mal-II is a lectin commonly used to detect α2–3 sialic acids, and is specific for sTa and di-sialylated T-antigen [68]. The anti-GPIbα antibody is specific for the human protein. An antibody that recognizes the rat homolog in western blots is not currently available. B: Putative structures of the O-glycans released from the human GPIbα sample. The structures are based on the precise masses and inferred monosaccharide composition (Table 4) in addition to the MS/MS fragmentation patterns. Brackets indicate cases where the position of monosaccharides could not be assigned. Monosaccharide symbols follow the Symbol Nomenclature for Glycans system [67]. C: Putative structures of the O-glycans released from the rat GPIbα sample. The structures are based on the precise masses and inferred monosaccharide composition (Table 5) in addition to MS/MS fragmentation data. Brackets indicate cases where the position of monosaccharides could not be assigned.
Sialic acid composition of human versus rat platelet GPIbα extract.
| Neu5Gc | Neu5Ac | Neu5Gc8Ac | Neu5,8Ac2 | Neu5,9Ac2 | Neu4,5Ac2 | total | |
|---|---|---|---|---|---|---|---|
| n/d | 94.91 | n/d | 2.63 | 2.46 | n/d | 100 | |
| 58.37 | 28.32 | 5.37 | n/d | 4.77 | 3.17 | 100 |
a values represent the percent of total sialic acids; Neu5Gc8Ac, 8-O-acetyl Neu5Gc; Neu5,8Ac2, 8-O-acetyl Neu5Ac; Neu5,9Ac2, 9-O-acetyl Neu5Ac; Neu4,5Ac2, 4-O-acetyl Neu5Ac; n/d not detected
Identification by mass spectrometry of O-glycans released from human platelet GPIbα.
| RT (min) | Mass | m/z | Volume | % Total | Composition |
|---|---|---|---|---|---|
| 676.259 | 677.264 | 55954 | 0.1 | 1-1-0-1 | |
| 896.351 | 897.355 | 66130 | 0.2 | 2-2-1-0 | |
| 1041.385 | 1042.393 | 1109306 | 2.9 | 2-2-0-1 | |
| 1058.403 | 1059.408 | 34603 | 0.1 | 3-2-1-0 | |
| 1042.406 | 1043.414 | 86869 | 0.2 | 2-2-2-0 | |
| 896.34 | 897.357 | 34603 | 0.1 | 3-2-1-0 | |
| 1187.442 | 594.729 | 995826 | 2.6 | 2-2-1-1 | |
| 1041.386 | 1042.393 | 892163 | 2.3 | 2-2-0-1 | |
| 750.287 | 751.296 | 321269 | 0.8 | 2-2-0-0 | |
| 1332.473 | 667.248 | 202429 | 0.5 | 2-2-0-2 | |
| 1332.482 | 667.249 | 33180240 | 86.0 | 2-2-0-2 | |
| 1697.612 | 849.818 | 112008 | 0.3 | 3-3-0-2 | |
| 1332.49 | 667.253 | 224937 | 0.6 | 2-2-0-2 | |
| 1697.618 | 849.815 | 1199390 | 3.1 | 3-3-0-2 | |
| 1041.396 | 1042.402 | 66130 | 0.2 | 2-2-0-1 |
aRetention time
bDaltons
cPrecursor ion mass to charge ratio
dHex-HexNAc-Fuc-NeuAc
Identification by mass spectrometry of O-glycans released from rat platelet GPIbα.
| RT (min) | Mass | m/z | Volume | % Total | Composition |
|---|---|---|---|---|---|
| 1057.379 | 529.698 | 195074 | 3.0 | 2-2-0-0-1-0 | |
| 1306.461 | 654.238 | 1413851 | 21.6 | 2-2-0-1-0-1 | |
| 1306.465 | 654.24 | 1422112 | 21.7 | 2-2-0-1-0-1 | |
| 1219.424 | 610.722 | 219467 | 3.4 | 3-2-0-0-1-0 | |
| 1364.468 | 683.241 | 895174 | 13.7 | 2-2-0-0-2-0 | |
| 1348.477 | 675.244 | 877659 | 13.4 | 2-2-0-1-1-0 | |
| 1332.481 | 667.249 | 555317 | 8.5 | 2-2-0-2-0-0 | |
| 1729.599 | 865.808 | 406896 | 6.2 | 3-3-0-0-2-0 | |
| 1713.611 | 857.813 | 348183 | 5.3 | 3-3-0-1-1-0 | |
| 1697.613 | 849.817 | 214646 | 3.3 | 3-3-0-2-0-0 |
aRetention time
bDaltons
cPrecursor ion mass to charge ratio
dHex-HexNAc-Fuc-NeuAc-NeuGc-Neu