Literature DB >> 31232620

The role of proteomics in assessing beta-cell dysfunction and death in type 1 diabetes.

Ernesto S Nakayasu1, Wei-Jun Qian1, Carmella Evans-Molina2, Raghavendra G Mirmira2, Decio L Eizirik3, Thomas O Metz1.   

Abstract

Introduction: Type 1 diabetes (T1D) is characterized by autoimmune-induced dysfunction and destruction of the pancreatic beta cells. Unfortunately, this process is poorly understood, and the current best treatment for type 1 diabetes is the administration of exogenous insulin. To better understand these mechanisms and to develop new therapies, there is an urgent need for biomarkers that can reliably predict disease stage. Areas covered: Mass spectrometry (MS)-based proteomics and complementary techniques play an important role in understanding the autoimmune response, inflammation and beta-cell death. MS is also a leading technology for the identification of biomarkers. This, and the technical difficulties and new technologies that provide opportunities to characterize small amounts of sample in great depth and to analyze large sample cohorts will be discussed in this review. Expert opinion: Understanding disease mechanisms and the discovery of disease-associated biomarkers are highly interconnected goals. Ideal biomarkers would be molecules specific to the different stages of the disease process that are released from beta cells to the bloodstream. However, such molecules are likely to be present in trace amounts in the blood due to the small number of pancreatic beta cells in the human body and the heterogeneity of the target organ and disease process.

Entities:  

Keywords:  beta cell dysfunction and death; neoantigens; type 1 diabetes

Mesh:

Year:  2019        PMID: 31232620      PMCID: PMC6628911          DOI: 10.1080/14789450.2019.1634548

Source DB:  PubMed          Journal:  Expert Rev Proteomics        ISSN: 1478-9450            Impact factor:   3.940


  133 in total

1.  A comprehensive analysis of cytokine-induced and nuclear factor-kappa B-dependent genes in primary rat pancreatic beta-cells.

Authors:  A K Cardozo; H Heimberg; Y Heremans; R Leeman; B Kutlu; M Kruhøffer; T Ørntoft; D L Eizirik
Journal:  J Biol Chem       Date:  2001-10-30       Impact factor: 5.157

2.  Characterization of peptides bound to the class I MHC molecule HLA-A2.1 by mass spectrometry.

Authors:  D F Hunt; R A Henderson; J Shabanowitz; K Sakaguchi; H Michel; N Sevilir; A L Cox; E Appella; V H Engelhard
Journal:  Science       Date:  1992-03-06       Impact factor: 47.728

Review 3.  Complementing the genome with an "exposome": the outstanding challenge of environmental exposure measurement in molecular epidemiology.

Authors:  Christopher Paul Wild
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2005-08       Impact factor: 4.254

4.  Conditional and specific NF-kappaB blockade protects pancreatic beta cells from diabetogenic agents.

Authors:  R Eldor; A Yeffet; K Baum; V Doviner; D Amar; Y Ben-Neriah; G Christofori; A Peled; J C Carel; C Boitard; T Klein; P Serup; D L Eizirik; D Melloul
Journal:  Proc Natl Acad Sci U S A       Date:  2006-03-21       Impact factor: 11.205

Review 5.  Quantitative mass spectrometry in proteomics: a critical review.

Authors:  Marcus Bantscheff; Markus Schirle; Gavain Sweetman; Jens Rick; Bernhard Kuster
Journal:  Anal Bioanal Chem       Date:  2007-08-01       Impact factor: 4.142

6.  Patterns of metabolic progression to type 1 diabetes in the Diabetes Prevention Trial-Type 1.

Authors:  Jay M Sosenko; Jerry P Palmer; Carla J Greenbaum; Jeffrey Mahon; Catherine Cowie; Jeffrey P Krischer; H Peter Chase; Neil H White; Bruce Buckingham; Kevan C Herold; David Cuthbertson; Jay S Skyler
Journal:  Diabetes Care       Date:  2006-03       Impact factor: 19.112

7.  Development and evaluation of a micro- and nanoscale proteomic sample preparation method.

Authors:  Haixing Wang; Wei-Jun Qian; Heather M Mottaz; Therese R W Clauss; David J Anderson; Ronald J Moore; David G Camp; Arshad H Khan; Daniel M Sforza; Maria Pallavicini; Desmond J Smith; Richard D Smith
Journal:  J Proteome Res       Date:  2005 Nov-Dec       Impact factor: 4.466

Review 8.  PAD, a growing family of citrullinating enzymes: genes, features and involvement in disease.

Authors:  Erik R Vossenaar; Albert J W Zendman; Walther J van Venrooij; Ger J M Pruijn
Journal:  Bioessays       Date:  2003-11       Impact factor: 4.345

9.  Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics.

Authors:  Shao-En Ong; Blagoy Blagoev; Irina Kratchmarova; Dan Bach Kristensen; Hanno Steen; Akhilesh Pandey; Matthias Mann
Journal:  Mol Cell Proteomics       Date:  2002-05       Impact factor: 5.911

10.  The insulin A-chain epitope recognized by human T cells is posttranslationally modified.

Authors:  Stuart I Mannering; Leonard C Harrison; Nicholas A Williamson; Jessica S Morris; Daniel J Thearle; Kent P Jensen; Thomas W H Kay; Jamie Rossjohn; Ben A Falk; Gerald T Nepom; Anthony W Purcell
Journal:  J Exp Med       Date:  2005-10-31       Impact factor: 14.307

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  3 in total

Review 1.  Endoplasmic Reticulum-Mitochondria Crosstalk and Beta-Cell Destruction in Type 1 Diabetes.

Authors:  Saurabh Vig; Joost M Lambooij; Arnaud Zaldumbide; Bruno Guigas
Journal:  Front Immunol       Date:  2021-04-16       Impact factor: 7.561

2.  Parallel Multi-Omics in High-Risk Subjects for the Identification of Integrated Biomarker Signatures of Type 1 Diabetes.

Authors:  Oscar Alcazar; Luis F Hernandez; Ernesto S Nakayasu; Carrie D Nicora; Charles Ansong; Michael J Muehlbauer; James R Bain; Ciara J Myer; Sanjoy K Bhattacharya; Peter Buchwald; Midhat H Abdulreda
Journal:  Biomolecules       Date:  2021-03-04

3.  Probing islet stress in type 1 diabetes.

Authors:  Ernesto S Nakayasu; Thomas O Metz; Raghavendra G Mirmira
Journal:  Aging (Albany NY)       Date:  2020-10-12       Impact factor: 5.682

  3 in total

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