Literature DB >> 31231777

How to correctly quantify neuronal phase-response curves from noisy recordings.

Janina Hesse1,2, Susanne Schreiber3,4.   

Abstract

At the level of individual neurons, various coding properties can be inferred from the input-output relationship of a cell. For small inputs, this relation is captured by the phase-response curve (PRC), which measures the effect of a small perturbation on the timing of the subsequent spike. Experimentally, however, an accurate experimental estimation of PRCs is challenging. Despite elaborate measurement efforts, experimental PRC estimates often cannot be related to those from modeling studies. In particular, experimental PRCs rarely resemble the characteristic theoretical PRC expected close to spike initiation, which is indicative of the underlying spike-onset bifurcation. Here, we show for conductance-based model neurons that the correspondence between theoretical and measured phase-response curve is lost when the stimuli used for the estimation are too large. In this case, the derived phase-response curve is distorted beyond recognition and takes on a generic shape that reflects the measurement protocol and masks the spike-onset bifurcation. We discuss how to identify appropriate stimulus strengths for perturbation and noise-stimulation methods, which permit to estimate PRCs that reliably reflect the spike-onset bifurcation - a task that is particularly difficult if a lower bound for the stimulus amplitude is dictated by prominent intrinsic neuronal noise.

Keywords:  Finite phase response curve; Intrinsic noise; Phase response curve measurement; Spike onset bifurcation

Mesh:

Year:  2019        PMID: 31231777     DOI: 10.1007/s10827-019-00719-3

Source DB:  PubMed          Journal:  J Comput Neurosci        ISSN: 0929-5313            Impact factor:   1.621


  40 in total

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6.  Phase-response curves give the responses of neurons to transient inputs.

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Journal:  J Neurophysiol       Date:  2005-04-13       Impact factor: 2.714

7.  Beyond two-cell networks: experimental measurement of neuronal responses to multiple synaptic inputs.

Authors:  Theoden I Netoff; Corey D Acker; Jonathan C Bettencourt; John A White
Journal:  J Comput Neurosci       Date:  2005-06       Impact factor: 1.621

8.  Efficient estimation of phase-resetting curves in real neurons and its significance for neural-network modeling.

Authors:  Roberto F Galán; G Bard Ermentrout; Nathaniel N Urban
Journal:  Phys Rev Lett       Date:  2005-04-19       Impact factor: 9.161

9.  Intrinsic noise in cultured hippocampal neurons: experiment and modeling.

Authors:  Kamran Diba; Henry A Lester; Christof Koch
Journal:  J Neurosci       Date:  2004-10-27       Impact factor: 6.167

10.  Computation of the phase response curve: a direct numerical approach.

Authors:  W Govaerts; B Sautois
Journal:  Neural Comput       Date:  2006-04       Impact factor: 2.026

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  1 in total

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Journal:  Nat Commun       Date:  2022-07-08       Impact factor: 17.694

  1 in total

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