Literature DB >> 31231134

Sex specific associations in genome wide association analysis of renal cell carcinoma.

Ruhina S Laskar1, David C Muller2, Peng Li3, Mitchell J Machiela4, Yuanqing Ye5, Valerie Gaborieau1, Matthieu Foll1, Jonathan N Hofmann4, Leandro Colli4, Joshua N Sampson4, Zhaoming Wang6, Delphine Bacq-Daian7, Anne Boland7, Behnoush Abedi-Ardekani1, Geoffroy Durand1, Florence Le Calvez-Kelm1, Nivonirina Robinot1, Helene Blanche8, Egor Prokhortchouk9,10, Konstantin G Skryabin9,10, Laurie Burdett4, Meredith Yeager4, Sanja Radojevic-Skodric11, Slavisa Savic12, Lenka Foretova13, Ivana Holcatova14, Vladimir Janout15,16, Dana Mates17, Stefan Rascu18, Anush Mukeria19, David Zaridze19, Vladimir Bencko20, Cezary Cybulski21, Eleonora Fabianova22, Viorel Jinga18, Jolanta Lissowska23, Jan Lubinski21, Marie Navratilova13, Peter Rudnai24, Beata Świątkowska25, Simone Benhamou26,27, Geraldine Cancel-Tassin28,29, Olivier Cussenot28,29, Antonia Trichopoulou30, Elio Riboli2, Kim Overvad31, Salvatore Panico32, Borje Ljungberg33, Raviprakash T Sitaram33, Graham G Giles34,35, Roger L Milne34,35, Gianluca Severi34,36, Fiona Bruinsma34, Tony Fletcher37, Kvetoslava Koppova22, Susanna C Larsson38, Alicja Wolk38, Rosamonde E Banks39, Peter J Selby39, Douglas F Easton40,41, Paul Pharoah40,41, Gabriella Andreotti4, Laura E Beane Freeman4, Stella Koutros4, Demetrius Albanes4, Satu Männistö42, Stephanie Weinstein4, Peter E Clark43, Todd L Edwards43, Loren Lipworth43, Hallie Carol44, Matthew L Freedman44, Mark M Pomerantz44, Eunyoung Cho45, Peter Kraft46, Mark A Preston47, Kathryn M Wilson46, J Michael Gaziano47, Howard D Sesso46, Amanda Black4, Neal D Freedman4, Wen-Yi Huang4, John G Anema48, Richard J Kahnoski48, Brian R Lane48,49, Sabrina L Noyes50, David Petillo50, Bin Tean Teh50, Ulrike Peters51, Emily White51, Garnet L Anderson52, Lisa Johnson52, Juhua Luo53, Wong-Ho Chow5, Lee E Moore4, Toni K Choueiri44, Christopher Wood5, Mattias Johansson1, James D McKay1, Kevin M Brown4, Nathaniel Rothman4, Mark G Lathrop54, Jean-Francois Deleuze7,8, Xifeng Wu5, Paul Brennan1, Stephen J Chanock4, Mark P Purdue4, Ghislaine Scelo55.   

Abstract

Renal cell carcinoma (RCC) has an undisputed genetic component and a stable 2:1 male to female sex ratio in its incidence across populations, suggesting possible sexual dimorphism in its genetic susceptibility. We conducted the first sex-specific genome-wide association analysis of RCC for men (3227 cases, 4916 controls) and women (1992 cases, 3095 controls) of European ancestry from two RCC genome-wide scans and replicated the top findings using an additional series of men (2261 cases, 5852 controls) and women (1399 cases, 1575 controls) from two independent cohorts of European origin. Our study confirmed sex-specific associations for two known RCC risk loci at 14q24.2 (DPF3) and 2p21(EPAS1). We also identified two additional suggestive male-specific loci at 6q24.3 (SAMD5, male odds ratio (ORmale) = 0.83 [95% CI = 0.78-0.89], Pmale = 1.71 × 10-8 compared with female odds ratio (ORfemale) = 0.98 [95% CI = 0.90-1.07], Pfemale = 0.68) and 12q23.3 (intergenic, ORmale = 0.75 [95% CI = 0.68-0.83], Pmale = 1.59 × 10-8 compared with ORfemale = 0.93 [95% CI = 0.82-1.06], Pfemale = 0.21) that attained genome-wide significance in the joint meta-analysis. Herein, we provide evidence of sex-specific associations in RCC genetic susceptibility and advocate the necessity of larger genetic and genomic studies to unravel the endogenous causes of sex bias in sexually dimorphic traits and diseases like RCC.

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Year:  2019        PMID: 31231134      PMCID: PMC6777615          DOI: 10.1038/s41431-019-0455-9

Source DB:  PubMed          Journal:  Eur J Hum Genet        ISSN: 1018-4813            Impact factor:   4.246


  10 in total

1.  Differences in risk factors for molecular subtypes of clear cell renal cell carcinoma.

Authors:  Mark P Purdue; Jongeun Rhee; Lee Moore; Xiaohua Gao; Xuezheng Sun; Erin Kirk; Vladimir Bencko; Vladimir Janout; Dana Mates; David Zaridze; Stacey Petruzella; Abraham Ari Hakimi; William Marston Linehan; Stephen J Chanock; Paul Brennan; Helena Furberg; Melissa Troester; Nathaniel Rothman
Journal:  Int J Cancer       Date:  2021-06-10       Impact factor: 7.316

2.  Germline polymorphisms in the Von Hippel-Lindau and Hypoxia-inducible factor 1-alpha genes, gene-environment and gene-gene interactions and renal cell cancer.

Authors:  Jeroen A A van de Pol; Piet A van den Brandt; Manon van Engeland; Roger W L Godschalk; Frederik-Jan van Schooten; Janneke G F Hogervorst; Leo J Schouten
Journal:  Sci Rep       Date:  2020-01-10       Impact factor: 4.379

3.  Sexual dimorphism in cancer: insights from transcriptional signatures in kidney tissue and renal cell carcinoma.

Authors:  Ruhina S Laskar; Peng Li; Szilvia Ecsedi; Behnoush Abedi-Ardekani; Geoffroy Durand; Nivonirina Robinot; Jean-Noël Hubert; Vladimir Janout; David Zaridze; Anush Mukeria; Dana Mates; Ivana Holcatova; Lenka Foretova; Beata Swiatkowska; Zoran Dzamic; Sasa Milosavljevic; Robert Olaso; Anne Boland; Jean-François Deleuze; David C Muller; James D McKay; Paul Brennan; Florence Le Calvez-Kelm; Ghislaine Scelo; Estelle Chanudet
Journal:  Hum Mol Genet       Date:  2021-04-27       Impact factor: 6.150

4.  Genomic Fabric Remodeling in Metastatic Clear Cell Renal Cell Carcinoma (ccRCC): A New Paradigm and Proposal for a Personalized Gene Therapy Approach.

Authors:  Dumitru A Iacobas; Victoria E Mgbemena; Sanda Iacobas; Kareena M Menezes; Huichen Wang; Premkumar B Saganti
Journal:  Cancers (Basel)       Date:  2020-12-08       Impact factor: 6.639

5.  Development and Validation of a Predictive Model to Evaluate the Risk of Bone Metastasis in Kidney Cancer.

Authors:  Shengtao Dong; Hua Yang; Zhi-Ri Tang; Yuqi Ke; Haosheng Wang; Wenle Li; Kang Tian
Journal:  Front Oncol       Date:  2021-11-25       Impact factor: 6.244

6.  The SWI/SNF chromatin remodeling factor DPF3 regulates metastasis of ccRCC by modulating TGF-β signaling.

Authors:  Hongyang Yi; Hongyu Bao; Ying Tan; Chi Tian; Huanhuan Cui; Xinyao Shi; Diwen Gan; Bin Zhang; Weizheng Liang; Rui Chen; Qionghua Zhu; Liang Fang; Xin Gao; Hongda Huang; Ruijun Tian; Silke R Sperling; Yuhui Hu; Wei Chen
Journal:  Nat Commun       Date:  2022-08-09       Impact factor: 17.694

7.  Coffee and caffeine consumption and risk of renal cell carcinoma: A Mendelian randomization study.

Authors:  Bing-Hui Li; Si-Yu Yan; Xu-Hui Li; Qiao Huang; Li-Sha Luo; Yun-Yun Wang; Jiao Huang; Ying-Hui Jin; Yong-Bo Wang
Journal:  Front Nutr       Date:  2022-08-22

8.  Pathological diagnostic nomograms for predicting malignant histology and unfavorable pathology in patients with endophytic renal tumor.

Authors:  Xinxi Deng; Xiaoqiang Liu; Bing Hu; Ming Jiang; Ke Zhu; Jianqiang Nie; Taobin Liu; Luyao Chen; Wen Deng; Bin Fu; Situ Xiong
Journal:  Front Oncol       Date:  2022-09-21       Impact factor: 5.738

Review 9.  Gender-Related Approach to Kidney Cancer Management: Moving Forward.

Authors:  Mariangela Mancini; Marialaura Righetto; Giovannella Baggio
Journal:  Int J Mol Sci       Date:  2020-05-10       Impact factor: 5.923

10.  Causal Associations between Serum Urea and Cancer: A Mendelian Randomization Study.

Authors:  Yandi Sun; Jingjia Li; Zihao Qu; Ze Yang; Xueyao Jia; Yindan Lin; Qian He; Lihong Zhang; Yan Luo
Journal:  Genes (Basel)       Date:  2021-03-29       Impact factor: 4.096

  10 in total

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