Literature DB >> 31228725

Whole-gene analysis of inter-genogroup reassortant rotaviruses from the Dominican Republic: Emergence of equine-like G3 strains and evidence of their reassortment with locally-circulating strains.

Eric M Katz1, Mathew D Esona2, Naga S Betrapally2, Lucia A De La Cruz De Leon3, Yenny R Neira4, Gloria J Rey5, Michael D Bowen6.   

Abstract

Inter-genogroup reassortant group A rotavirus (RVA) strains possessing a G3 VP7 gene of putative equine origin (EQL-G3) have been detected in humans since 2013. Here we report detection of EQL-G3P[8] RVA strains from the Dominican Republic collected in 2014-16. Whole-gene analysis of RVA in stool specimens revealed 16 EQL-G3P[8] strains, 3 of which appear to have acquired an N1 NSP1 gene from locally-circulating G9P[8] strains and a novel G2P[8] reassortant possessing 7 EQL-G3-associated genes and 3 genes from a locally-circulating G2P[4] strain. Phylogenetic/genetic analyses of VP7 gene sequences revealed nine G3 lineages (I-IX) with newly-assigned lineage IX encompassing all reported human EQL-G3 strains along with the ancestral equine strain. VP1 and NSP2 gene phylogenies suggest that EQL-G3P[8] strains were introduced into the Dominican Republic from Thailand. The emergence of EQL-G3P[8] strains in the Dominican Republic and their reassortment with locally-circulating RVA could have implications for current vaccination strategies. Published by Elsevier Inc.

Entities:  

Keywords:  Equine-like G3 rotavirus; Gastroenteritis; Group A rotavirus; Reassortment; Vaccine

Mesh：

Substances：

Year:  2019        PMID： 31228725     DOI： 10.1016/j.virol.2019.06.007

Source DB:  PubMed          Journal:  Virology        ISSN： 0042-6822            Impact factor:   3.616


  16 in total

1.  Development of a Real-Time Reverse Transcription-PCR Assay To Detect and Quantify Group A Rotavirus Equine-Like G3 Strains.

Authors:  Eric M Katz; Mathew D Esona; Rashi Gautam; Michael D Bowen
Journal:  J Clin Microbiol       Date:  2021-08-25       Impact factor: 5.948

2.  Nosocomial acute gastroenteritis outbreak caused by an equine-like G3P[8] DS-1-like rotavirus and GII.4 Sydney[P16] norovirus at a pediatric hospital in Rio de Janeiro, Brazil, 2019.

Authors:  Meylin B Gutierrez; Mirza Rocha de Figueiredo; Alexandre Madi Fialho; Carina Pacheco Cantelli; Marize Pereira Miagostovich; Tulio Machado Fumian
Journal:  Hum Vaccin Immunother       Date:  2021-08-17       Impact factor: 4.526

3.  Norovirus and Other Viral Causes of Medically Attended Acute Gastroenteritis Across the Age Spectrum: Results from the Medically Attended Acute Gastroenteritis Study in the United States.

Authors:  Rachel M Burke; Claire P Mattison; Zachary Marsh; Kayoko Shioda; Judy Donald; S Bianca Salas; Allison L Naleway; Christianne Biggs; Mark A Schmidt; Aron J Hall
Journal:  Clin Infect Dis       Date:  2021-08-16       Impact factor: 20.999

4.  Reverse Genetics Approach for Developing Rotavirus Vaccine Candidates Carrying VP4 and VP7 Genes Cloned from Clinical Isolates of Human Rotavirus.

Authors:  Yuta Kanai; Misa Onishi; Takahiro Kawagishi; Pimfhun Pannacha; Jeffery A Nurdin; Ryotaro Nouda; Moeko Yamasaki; Tina Lusiany; Pattara Khamrin; Shoko Okitsu; Satoshi Hayakawa; Hirotaka Ebina; Hiroshi Ushijima; Takeshi Kobayashi
Journal:  J Virol       Date:  2020-12-22       Impact factor: 5.103

5.  Rotavirus Vaccine Is Effective Against Rotavirus Gastroenteritis Resulting in Outpatient Care: Results From the Medically Attended Acute Gastroenteritis (MAAGE) Study.

Authors:  Rachel M Burke; Holly C Groom; Allison L Naleway; Eric M Katz; Bianca Salas; Claire P Mattison; Judy Donald; Laura Tsaknaridis; Christianne Biggs; Michael D Bowen; Jacqueline E Tate; Umesh D Parashar; Mark Schmidt; Aron J Hall
Journal:  Clin Infect Dis       Date:  2021-06-01       Impact factor: 20.999

6.  High prevalence of DS-1-like rotavirus infection in Thai adults between 2016 and 2019.

Authors:  Jira Chansaenroj; Watchaporn Chuchaona; Fajar Budi Lestari; Siripat Pasittungkul; Sirapa Klinfueng; Nasamon Wanlapakorn; Sompong Vongpunsawad; Chintana Chirathaworn; Yong Poovorawan
Journal:  PLoS One       Date:  2020-06-25       Impact factor: 3.240

7.  Full genome characterization of novel DS-1-like G9P[8] rotavirus strains that have emerged in Thailand.

Authors:  Saori Fukuda; Ratana Tacharoenmuang; Ratigorn Guntapong; Sompong Upachai; Phakapun Singchai; Tomihiko Ide; Riona Hatazawa; Karun Sutthiwarakom; Santip Kongjorn; Napa Onvimala; Kriangsak Ruchusatsawast; Pimpa Rungnopakun; Jutarat Mekmallika; Yoshiki Kawamura; Kazushi Motomura; Masashi Tatsumi; Naokazu Takeda; Takayuki Murata; Tetsushi Yoshikawa; Ballang Uppapong; Koki Taniguchi; Satoshi Komoto
Journal:  PLoS One       Date:  2020-04-22       Impact factor: 3.240

8.  Prevalence and Genetic Diversity of Group A Rotavirus Genotypes in Moscow (2019-2020).

Authors:  Anton Yuzhakov; Ksenia Yuzhakova; Nadezhda Kulikova; Lidia Kisteneva; Stanislav Cherepushkin; Svetlana Smetanina; Marina Bazarova; Anton Syroeshkin; Tatiana Grebennikova
Journal:  Pathogens       Date:  2021-05-30

9.  Wa-1 Equine-Like G3P[8] Rotavirus from a Child with Diarrhea in Colombia.

Authors:  Marlen Martinez-Gutierrez; Estiven Hernandez-Mira; Santiago Rendon-Marin; Julian Ruiz-Saenz
Journal:  Viruses       Date:  2021-06-04       Impact factor: 5.048

10.  Identity-by-descent with uncertainty characterises connectivity of Plasmodium falciparum populations on the Colombian-Pacific coast.

Authors:  Aimee R Taylor; Diego F Echeverry; Timothy J C Anderson; Daniel E Neafsey; Caroline O Buckee
Journal:  PLoS Genet       Date:  2020-11-16       Impact factor: 5.917
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