| Literature DB >> 31223582 |
Hamid Dargahi1, Mohammad Hossein Nicknam1,2, Mahroo Mirahmadian1, Mahdi Mahmoudi3, Saeed Aslani3, Maryam Sadrosadat2, Robabeh Ghodssi-Ghassemabadi2, Ali Akbar Amirzargar1,2.
Abstract
BACKGROUND: Endoplasmic reticulum aminopeptidases 1 and 2 (ERAP1 and 2) are involved in blood pressure regulation and single nucleotide polymorphisms (SNPs) of these genes have been linked to preeclampsia. This study intended to assess the association of ERAP1 and 2 genes polymorphism with Iranian preeclamptic women.Entities:
Keywords: Endoplasmic reticulum aminopeptidases 1 and 2; Preeclampsia; Single nucleotide polymorphism
Year: 2019 PMID: 31223582 PMCID: PMC6570806
Source DB: PubMed Journal: Iran J Public Health ISSN: 2251-6085 Impact factor: 1.429
Clinical specifications of the study subjects
| Age(yr) | 32.7 ± 6.9 | 33.9 ± 5.3 | 0.18 |
| Diastolic Blood Pressure (mm Hg) | 87.3 ± 12.1 | 77.9 ± 5.73 | <0.0001 |
| Systolic Blood Pressure (mm Hg) | 138.8 ± 21.55 | 117 ± 7.6 | <0.0001 |
| Proteinuria | 1.95 ± 1.2 | 0.13 ± 0.09 | <0.0001 |
| Abortion | 13 (Yes) | 10 (Yes) | 0.07 |
| 135 (No) | 123 (No) | ||
| Time of Abortion | 0.15 ± 1.2 | 0.27 ± 0.61 | 0.33 |
| Height (cm) | 164.2 ± 6.9 | 161.2 ± 7.75 | 0.0007 |
| Weight (kg) | 78.9 ± 11.5 | 69.8 ± 13.11 | 0.01 |
| BMI (kg/m2) | 29.28 ± 0.31 | 26.87 ± 0.39 | <0.0001 |
Properties of investigated polymorphisms in preeclampsia patients and healthy controls
| rs28096 | A | A/G | 96135000 | Intronic | |
| rs30187 | T | C/T | 96150086 | Lys528Arg | |
| rs26653 | C | C/G | 96165006 | Arg127Pro | |
| rs3734016 | G | A/G | 96165220 | Glu56Lys | |
| ERAP-2 | rs34750 | G | C/G | 96168562 | Intronic |
| rs2549782 | G | G/T | 96256756 | Lys392Asn | |
| rs17408150 | A | A/T | 96265014 | Leu669Gln |
Allele and genotype distribution of various SNPs of ERAP1, 2 in preeclampsia cases and healthy controls
| rs28096 | A | 110 (37.4) | 105 (39.5) | 0.61 | 0.91 (0.65–1.28) |
| G | 184 (62.16) | 161 (60.5) | 0.61 | 1.09 (0.77–1.53) | |
| AA | 19 (12.9) | 20 (15.0) | 0.61 | 0.83 (0.42–1.65) | |
| AG | 72 (49.0) | 65 (48.9) | 0.98 | 1.00 (0.62–1.60) | |
| GG | 56 (38.1) | 48 (36.1) | 0.72 | 1.08 (0.67–1.77) | |
| HWE | 0.798 | ||||
| rs30187 | T | 129 (43.6) | 102 (38.9) | 0.26 | 1.21 (0.86–1.69) |
| C | 167 (56.4) | 160 (61.1) | 0.26 | 0.82 (0.58–1.15) | |
| TT | 28 (18.9) | 18 (13.7) | 0.24 | 1.46 (0.76–2.79) | |
| TC | 73 (49.3) | 66 (50.4) | 0.86 | 0.95 (0.59–1.53) | |
| CC | 47 (31.8) | 47 (35.9) | 0.46 | 0.83 (0.50–1.36) | |
| HWE | 0.498 | ||||
| rs26653 | C | 122 (41.5) | 112 (42.1) | 0.88 | 0.97 (0.69–1.36) |
| G | 172 (58.5) | 154 (57.9) | 0.88 | 1.02 (0.73–1.43) | |
| CC | 27 (18.4) | 25 (18.8) | 0.92 | 0.97 (0.53–1.77) | |
| CG | 68 (46.3) | 62 (46.6) | 0.95 | 0.98 (0.61–1.57) | |
| GG | 52 (35.4) | 46 (34.6) | 0.89 | 1.03 (0.63–1.69) | |
| HWE | 0.618 | ||||
| rs3734016 | A | 293 (99.0) | 266 (100) | 0.099 | - |
| G | 3 (1) | 0 (0) | 0.099 | - | |
| AA | 145 (98.0) | 133 (100) | 0.099 | - | |
| AG | 3 (2) | 0 (0) | 0.099 | - | |
| GG | 0 (.0) | 0 (0) | - | - | |
| HWE | 1.00 | ||||
| rs34750 | C | 174 (59.18) | 155 (58.27) | 0.82 | 1.03 (0.74–1.45) |
| G | 120 (40.82) | 111 (41.73) | 0.82 | 0.96 (0.68–1.34) | |
| CC | 54 (36.73) | 47 (35.34) | 0.80 | 1.06 (0.65–1.73) | |
| CG | 66 (44.90) | 61 (45.86) | 0.87 | 0.96 (0.60–1.54) | |
| GG | 27 (18.37) | 25 (18.80) | 0.21 | 0.97 (0.53–1.77) | |
| HWE | 0.51 | ||||
| rs2549782 | T | 121 (40.88) | 107 (40.23) | 0.87 | 1.02 (0.73–1.43) |
| G | 175 (59.12) | 159 (59.77) | 0.87 | 0.97 (0.69–1.36) | |
| TT | 51 (34.5) | 43 (32.3) | 0.70 | 1.10 (0.66–1.80) | |
| TG | 73 (49.3) | 73 (54.9) | 0.35 | 0.80 (0.50–1.27) | |
| GG | 24 (16.2) | 17 (12.8) | 0.41 | 1.32 (0.67–2.58) | |
| HWE | 0.10 | ||||
| rs17408150 | A | 25 (8.4) | 34 (12.8) | 0.094 | 0.62 (0.36–1.08) |
| T | 271 (91.6) | 232 (87.2) | 0.094 | 1.58 (0.92–2.74) | |
| AA | 0 (0) | 3 (2.3) | 0.066 | - | |
| AT | 25 (16.9) | 28(21.1) | 0.37 | 0.76 (0.41–1.38) | |
| TT | 123 (83.1) | 102(76.7) | 0.17 | 1.49 (0.83–2.69) | |
| HWE | 0.52 |
OR, odds ratio; CI, confidence interval; - means Not Calculated
Fig. 1:Linkage disequilibrium (LD) diagrams for ERAP1 and 2 genes in Iranian preeclamptic patients. Diagrams are for seven SNPs in LD values (SNP order: rs28096, rs30187, rs26653, rs3734016, rs3734016, rs34750, rs2549782, rs17408150). Left and right diagram demonstrate the D′ and r values, respectively. Dark blocks represent the values between 0.85 and 1.00, grey blocks between 0.50 and 0.85, and white blocks show less than 0.50 values
Overall haplotype associations of the single-nucleotide polymorphisms according to Haploview
| 1 | A | C | C | A | G | T | T | 31 (10) | 26 (10) | 1.05 (0.60–1.81) | 0.85 |
| 2 | A | C | G | A | C | G | T | 29 (10) | 7 (3) | 3.65 (1.63–8.20) | 0.00082 |
| 3 | A | C | G | A | C | T | T | 43 (15) | 61 (23) | 0.55 (0.36–0.86) | 0.00791 |
| 4 | A | T | C | A | G | G | A | 1 (0.5) | 1 (0.4) | - | - |
| 5 | G | C | G | A | C | G | T | 41 (14) | 39 (15) | 0.91 (0.56–1.46) | 0.70 |
| 6 | G | C | G | A | C | T | T | 12 (4) | 17 (6) | 0.63 (0.30–1.33) | 0.22 |
| 7 | G | T | C | A | G | G | A | 10 (3.6) | 20 (8) | 0.41 (0.19–0.89) | 0.02 |
| 8 | G | T | C | A | G | G | T | 18 (6.2) | 14 (5.5) | 1.12 (0.55–2.30) | 0.74 |
| 9 | G | T | C | A | G | T | T | 56 (19.3) | 40 (15) | 1.30 (0.83–2.03) | 0.24 |
| 10 | G | T | G | A | C | G | A | 12 (4.4) | 11 (4) | 1.02 (0.44–2.32) | 0.96 |
| 11 | G | T | G | A | C | G | T | 2 (0.8) | 2 (1.1) | - | - |
| 12 | G | T | G | A | C | T | T | 24 (8.5) | 9 (4) | 2.40 (1.12–5.15) | 0.02 |
OR, odds ratio; CI, 95% confidence interval for difference between Haplotype frequency of case-control; -means Not Calculated