Literature DB >> 31221752

Rapid assembly and profiling of an anticoagulant sulfoprotein library.

Emma E Watson1, Jorge Ripoll-Rozada2,3, Ashley C Lee4,5, Mike C L Wu4,5, Charlotte Franck1, Tim Pasch1, Bhavesh Premdjee1, Jessica Sayers1, Maria F Pinto2,3,6, Pedro M Martins2,3,6, Shaun P Jackson4,5,7, Pedro José Barbosa Pereira2,3, Richard J Payne8.   

Abstract

Hematophagous organisms produce a suite of salivary proteins which interact with the host's coagulation machinery to facilitate the acquisition and digestion of a bloodmeal. Many of these biomolecules inhibit the central blood-clotting serine proteinase thrombin that is also the target of several clinically approved anticoagulants. Here a bioinformatics approach is used to identify seven tick proteins with putative thrombin inhibitory activity that we predict to be posttranslationally sulfated at two conserved tyrosine residues. To corroborate the biological role of these molecules and investigate the effects of amino acid sequence and sulfation modifications on thrombin inhibition and anticoagulant activity, a library of 34 homogeneously sulfated protein variants were rapidly assembled using one-pot diselenide-selenoester ligation (DSL)-deselenization chemistry. Downstream functional characterization validated the thrombin-directed activity of all target molecules and revealed that posttranslational sulfation of specific tyrosine residues crucially modulates potency. Importantly, access to this homogeneously modified protein library not only enabled the determination of key structure-activity relationships and the identification of potent anticoagulant leads, but also revealed subtleties in the mechanism of thrombin inhibition, between and within the families, that would be impossible to predict from the amino acid sequence alone. The synthetic platform described here therefore serves as a highly valuable tool for the generation and thorough characterization of libraries of related peptide and/or protein molecules (with or without modifications) for the identification of lead candidates for medicinal chemistry programs.

Entities:  

Keywords:  blood clotting; ligation; protein; synthesis; thrombin

Year:  2019        PMID: 31221752      PMCID: PMC6628821          DOI: 10.1073/pnas.1905177116

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  34 in total

Review 1.  Role of arthropod saliva in blood feeding: sialome and post-sialome perspectives.

Authors:  Jose M C Ribeiro; Ivo M B Francischetti
Journal:  Annu Rev Entomol       Date:  2002-06-04       Impact factor: 19.686

2.  The Sulfinator: predicting tyrosine sulfation sites in protein sequences.

Authors:  Flavio Monigatti; Elisabeth Gasteiger; Amos Bairoch; Eva Jung
Journal:  Bioinformatics       Date:  2002-05       Impact factor: 6.937

3.  A new type of synthetic peptide library for identifying ligand-binding activity.

Authors:  K S Lam; S E Salmon; E M Hersh; V J Hruby; W M Kazmierski; R J Knapp
Journal:  Nature       Date:  1991-11-07       Impact factor: 49.962

4.  Optimized selective N-methylation of peptides on solid support.

Authors:  Eric Biron; Jayanta Chatterjee; Horst Kessler
Journal:  J Pept Sci       Date:  2006-03       Impact factor: 1.905

5.  A comprehensive approach to the synthesis of sulfate esters.

Authors:  Levi S Simpson; Theodore S Widlanski
Journal:  J Am Chem Soc       Date:  2006-02-08       Impact factor: 15.419

Review 6.  New anticoagulants for treatment of venous thromboembolism.

Authors:  Peter L Gross; Jeffrey I Weitz
Journal:  Arterioscler Thromb Vasc Biol       Date:  2008-03       Impact factor: 8.311

7.  N-methylation of peptides: a new perspective in medicinal chemistry.

Authors:  Jayanta Chatterjee; Chaim Gilon; Amnon Hoffman; Horst Kessler
Journal:  Acc Chem Res       Date:  2008-07-18       Impact factor: 22.384

8.  Evolution of hematophagy in ticks: common origins for blood coagulation and platelet aggregation inhibitors from soft ticks of the genus Ornithodoros.

Authors:  Ben J Mans; Abraham I Louw; Albert W H Neitz
Journal:  Mol Biol Evol       Date:  2002-10       Impact factor: 16.240

Review 9.  The role of saliva in tick feeding.

Authors:  Ivo M B Francischetti; Anderson Sa-Nunes; Ben J Mans; Isabel M Santos; Jose M C Ribeiro
Journal:  Front Biosci (Landmark Ed)       Date:  2009-01-01

10.  Isolation, cloning and structural characterisation of boophilin, a multifunctional Kunitz-type proteinase inhibitor from the cattle tick.

Authors:  Sandra Macedo-Ribeiro; Carla Almeida; Bárbara M Calisto; Thomas Friedrich; Reinhard Mentele; Jörg Stürzebecher; Pablo Fuentes-Prior; Pedro José Barbosa Pereira
Journal:  PLoS One       Date:  2008-02-20       Impact factor: 3.240

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  4 in total

1.  Posttranslational modifications of α-conotoxins: sulfotyrosine and C-terminal amidation stabilise structures and increase acetylcholine receptor binding.

Authors:  Thao N T Ho; Han Siean Lee; Shilpa Swaminathan; Lewis Goodwin; Nishant Rai; Brianna Ushay; Richard J Lewis; K Johan Rosengren; Anne C Conibear
Journal:  RSC Med Chem       Date:  2021-07-26

Review 2.  Synthetic Thiol and Selenol Derived Amino Acids for Expanding the Scope of Chemical Protein Synthesis.

Authors:  Ivy Guan; Kayla Williams; Joanna Shu Ting Liu; Xuyu Liu
Journal:  Front Chem       Date:  2022-02-14       Impact factor: 5.221

3.  Unleashing the potential of noncanonical amino acid biosynthesis to create cells with precision tyrosine sulfation.

Authors:  Yuda Chen; Shikai Jin; Mengxi Zhang; Yu Hu; Kuan-Lin Wu; Anna Chung; Shichao Wang; Zeru Tian; Yixian Wang; Peter G Wolynes; Han Xiao
Journal:  Nat Commun       Date:  2022-09-16       Impact factor: 17.694

Review 4.  TickSialoFam (TSFam): A Database That Helps to Classify Tick Salivary Proteins, a Review on Tick Salivary Protein Function and Evolution, With Considerations on the Tick Sialome Switching Phenomenon.

Authors:  José M C Ribeiro; Ben J Mans
Journal:  Front Cell Infect Microbiol       Date:  2020-07-24       Impact factor: 5.293

  4 in total

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