| Literature DB >> 31218622 |
Koichi Matsuo1, Kunihiko Gekko2.
Abstract
Circular-dichroism (CD) spectroscopy is a powerful tool for the secondary-structure analysis of proteins. The structural information obtained by CD does not have atomic-level resolution (unlike X-ray crystallography and NMR spectroscopy), but it has the great advantage of being applicable to both nonnative and native proteins in a wide range of solution conditions containing lipids and detergents. The development of synchrotron-radiation CD (SRCD) instruments has greatly expanded the utility of this method by extending the spectra to the vacuum-ultraviolet region below 190 nm and producing information that is unobtainable by conventional CD instruments. Combining SRCD data with bioinformatics provides new insight into the conformational changes of proteins in a membrane environment.Entities:
Keywords: Circular-dichroism spectroscopy; Conformational change; Lipid environment; Membrane protein; Neural network; Secondary-structure analysis; Sequence-based prediction; Synchrotron radiation; Vacuum-ultraviolet circular dichroism
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Year: 2019 PMID: 31218622 DOI: 10.1007/978-1-4939-9512-7_12
Source DB: PubMed Journal: Methods Mol Biol ISSN: 1064-3745