Literature DB >> 31218622

Circular-Dichroism and Synchrotron-Radiation Circular-Dichroism Spectroscopy as Tools to Monitor Protein Structure in a Lipid Environment.

Koichi Matsuo1, Kunihiko Gekko2.   

Abstract

Circular-dichroism (CD) spectroscopy is a powerful tool for the secondary-structure analysis of proteins. The structural information obtained by CD does not have atomic-level resolution (unlike X-ray crystallography and NMR spectroscopy), but it has the great advantage of being applicable to both nonnative and native proteins in a wide range of solution conditions containing lipids and detergents. The development of synchrotron-radiation CD (SRCD) instruments has greatly expanded the utility of this method by extending the spectra to the vacuum-ultraviolet region below 190 nm and producing information that is unobtainable by conventional CD instruments. Combining SRCD data with bioinformatics provides new insight into the conformational changes of proteins in a membrane environment.

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Keywords:  Circular-dichroism spectroscopy; Conformational change; Lipid environment; Membrane protein; Neural network; Secondary-structure analysis; Sequence-based prediction; Synchrotron radiation; Vacuum-ultraviolet circular dichroism

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Year:  2019        PMID: 31218622     DOI: 10.1007/978-1-4939-9512-7_12

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  1 in total

1.  Spectroscopic and in silico investigation of the interaction between GH1 β-glucosidase and ginsenoside Rb1.

Authors:  Shuning Zhong; Mi Yan; Haoyang Zou; Ping Zhao; Haiqing Ye; Tiehua Zhang; Changhui Zhao
Journal:  Food Sci Nutr       Date:  2021-02-09       Impact factor: 2.863

  1 in total

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