Literature DB >> 31213186

The effects of the neonicotinoid imidacloprid on gene expression and DNA methylation in the buff-tailed bumblebee Bombus terrestris.

P S A Bebane1, B J Hunt2, M Pegoraro1, A R C Jones1, H Marshall1, E Rosato1, E B Mallon1.   

Abstract

Neonicotinoids are effective insecticides used on many important arable and horticultural crops. They are nicotinic acetylcholine receptor agonists which disrupt the function of insect neurons and cause paralysis and death. In addition to direct mortality, there are numerous sublethal effects of low doses of neonicotinoids on bees. We hypothesize that some of these large array of effects could be a consequence of epigenetic changes in bees induced by neonicotinoids. We compared whole methylome (BS-seq) and RNA-seq libraries of the brains of buff-tailed bumblebee Bombus terrestris workers exposed to field-realistic doses of the neonicotinoid imidacloprid to libraries from control workers. We found numerous genes which show differential expression between neonicotinoid-treated bees and control bees, but no differentially methylated cytosines in any context. We found CpG methylation to be focused mainly in exons and associated with highly expressed genes. We discuss the implications of our results for future legislation.

Entities:  

Keywords:  BS-seq; RNA-seq; epigenetics; methylome; pesticide; social insects

Mesh:

Substances:

Year:  2019        PMID: 31213186      PMCID: PMC6599982          DOI: 10.1098/rspb.2019.0718

Source DB:  PubMed          Journal:  Proc Biol Sci        ISSN: 0962-8452            Impact factor:   5.349


  76 in total

1.  Genome, transcriptome and methylome sequencing of a primitively eusocial wasp reveal a greatly reduced DNA methylation system in a social insect.

Authors:  Daniel S Standage; Ali J Berens; Karl M Glastad; Andrew J Severin; Volker P Brendel; Amy L Toth
Journal:  Mol Ecol       Date:  2016-03-15       Impact factor: 6.185

2.  Seed coating with a neonicotinoid insecticide negatively affects wild bees.

Authors:  Maj Rundlöf; Georg K S Andersson; Riccardo Bommarco; Ingemar Fries; Veronica Hederström; Lina Herbertsson; Ove Jonsson; Björn K Klatt; Thorsten R Pedersen; Johanna Yourstone; Henrik G Smith
Journal:  Nature       Date:  2015-04-22       Impact factor: 49.962

3.  Reproductive workers show queenlike gene expression in an intermediately eusocial insect, the buff-tailed bumble bee Bombus terrestris.

Authors:  Mark C Harrison; Robert L Hammond; Eamonn B Mallon
Journal:  Mol Ecol       Date:  2015-05-26       Impact factor: 6.185

4.  HISAT: a fast spliced aligner with low memory requirements.

Authors:  Daehwan Kim; Ben Langmead; Steven L Salzberg
Journal:  Nat Methods       Date:  2015-03-09       Impact factor: 28.547

5.  RNA interference knockdown of DNA methyl-transferase 3 affects gene alternative splicing in the honey bee.

Authors:  Hongmei Li-Byarlay; Yang Li; Hume Stroud; Suhua Feng; Thomas C Newman; Megan Kaneda; Kirk K Hou; Kim C Worley; Christine G Elsik; Samuel A Wickline; Steven E Jacobsen; Jian Ma; Gene E Robinson
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-12       Impact factor: 11.205

6.  Role for beta-catenin and HOX transcription factors in Caenorhabditis elegans and mammalian host epithelial-pathogen interactions.

Authors:  Javier E Irazoqui; Aylwin Ng; Ramnik J Xavier; Frederick M Ausubel
Journal:  Proc Natl Acad Sci U S A       Date:  2008-11-03       Impact factor: 11.205

7.  Epigenetic regulation of the honey bee transcriptome: unravelling the nature of methylated genes.

Authors:  Sylvain Foret; Robert Kucharski; Yvonne Pittelkow; Gabrielle A Lockett; Ryszard Maleszka
Journal:  BMC Genomics       Date:  2009-10-14       Impact factor: 3.969

8.  Widespread contamination of wildflower and bee-collected pollen with complex mixtures of neonicotinoids and fungicides commonly applied to crops.

Authors:  Arthur David; Cristina Botías; Alaa Abdul-Sada; Elizabeth Nicholls; Ellen L Rotheray; Elizabeth M Hill; Dave Goulson
Journal:  Environ Int       Date:  2016-01-04       Impact factor: 9.621

9.  Evaluation and integration of functional annotation pipelines for newly sequenced organisms: the potato genome as a test case.

Authors:  David Amar; Itziar Frades; Agnieszka Danek; Tatyana Goldberg; Sanjeev K Sharma; Pete E Hedley; Estelle Proux-Wera; Erik Andreasson; Ron Shamir; Oren Tzfadia; Erik Alexandersson
Journal:  BMC Plant Biol       Date:  2014-12-05       Impact factor: 4.215

10.  Genome-wide and caste-specific DNA methylomes of the ants Camponotus floridanus and Harpegnathos saltator.

Authors:  Roberto Bonasio; Qiye Li; Jinmin Lian; Navdeep S Mutti; Lijun Jin; Hongmei Zhao; Pei Zhang; Ping Wen; Hui Xiang; Yun Ding; Zonghui Jin; Steven S Shen; Zongji Wang; Wen Wang; Jun Wang; Shelley L Berger; Jürgen Liebig; Guojie Zhang; Danny Reinberg
Journal:  Curr Biol       Date:  2012-08-09       Impact factor: 10.834

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  11 in total

Review 1.  Chronic Effects of Imidacloprid on Honey Bee Worker Development-Molecular Pathway Perspectives.

Authors:  Yun-Ru Chen; David T W Tzeng; En-Cheng Yang
Journal:  Int J Mol Sci       Date:  2021-10-31       Impact factor: 5.923

2.  Methylation and gene expression differences between reproductive and sterile bumblebee workers.

Authors:  Hollie Marshall; Zoë N Lonsdale; Eamonn B Mallon
Journal:  Evol Lett       Date:  2019-08-05

3.  Interaction of field realistic doses of clothianidin and Varroa destructor parasitism on adult honey bee (Apis mellifera L.) health and neural gene expression, and antagonistic effects on differentially expressed genes.

Authors:  Nuria Morfin; Paul H Goodwin; Ernesto Guzman-Novoa
Journal:  PLoS One       Date:  2020-02-20       Impact factor: 3.240

4.  DNA methylation suppresses chitin degradation and promotes the wing development by inhibiting Bmara-mediated chitinase expression in the silkworm, Bombyx mori.

Authors:  Guanfeng Xu; Yangqin Yi; Hao Lyu; Chengcheng Gong; Qili Feng; Qisheng Song; Xuezhen Peng; Lin Liu; Sichun Zheng
Journal:  Epigenetics Chromatin       Date:  2020-09-04       Impact factor: 4.954

5.  Bumblebee Workers Show Differences in Allele-Specific DNA Methylation and Allele-Specific Expression.

Authors:  Hollie Marshall; Alun R C Jones; Zoë N Lonsdale; Eamonn B Mallon
Journal:  Genome Biol Evol       Date:  2020-08-01       Impact factor: 3.416

6.  Gene expression during larval caste determination and differentiation in intermediately eusocial bumblebees, and a comparative analysis with advanced eusocial honeybees.

Authors:  David H Collins; Anders Wirén; Marjorie Labédan; Michael Smith; David C Prince; Irina Mohorianu; Tamas Dalmay; Andrew F G Bourke
Journal:  Mol Ecol       Date:  2021-01-07       Impact factor: 6.185

7.  The effect of DNA methylation on bumblebee colony development.

Authors:  María I Pozo; Benjamin J Hunt; Gaby Van Kemenade; Jose M Guerra-Sanz; Felix Wäckers; Eamonn B Mallon; Hans Jacquemyn
Journal:  BMC Genomics       Date:  2021-01-22       Impact factor: 3.969

Review 8.  Phenotypic Plasticity: What Has DNA Methylation Got to Do with It?

Authors:  Elizabeth J Duncan; Christopher B Cunningham; Peter K Dearden
Journal:  Insects       Date:  2022-01-19       Impact factor: 2.769

9.  Missing Nurse Bees-Early Transcriptomic Switch From Nurse Bee to Forager Induced by Sublethal Imidacloprid.

Authors:  Yun-Ru Chen; David T W Tzeng; Chieh Ting; Pei-Shou Hsu; Tzu-Hsien Wu; Silin Zhong; En-Cheng Yang
Journal:  Front Genet       Date:  2021-06-17       Impact factor: 4.599

Review 10.  Impacts of Neonicotinoids on the Bumble Bees Bombus terrestris and Bombus impatiens Examined through the Lens of an Adverse Outcome Pathway Framework.

Authors:  Allison A Camp; David M Lehmann
Journal:  Environ Toxicol Chem       Date:  2021-01-21       Impact factor: 4.218

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