Literature DB >> 31209695

EECoG-Comp: An Open Source Platform for Concurrent EEG/ECoG Comparisons-Applications to Connectivity Studies.

Qing Wang1,2, Pedro Antonio Valdés-Hernández3, Deirel Paz-Linares1, Jorge Bosch-Bayard4, Naoya Oosugi5, Misako Komatsu6, Naotaka Fujii5, Pedro Antonio Valdés-Sosa7,8,9.   

Abstract

Electrophysiological Source Imaging (ESI) is hampered by lack of "gold standards" for model validation. Concurrent electroencephalography (EEG) and electrocorticography (ECoG) experiments (EECoG) are useful for this purpose, especially primate models due to their flexibility and translational value for human research. Unfortunately, there is only one EECoG experiments in the public domain that we know of: the Multidimensional Recording (MDR) is based on a single monkey ( www.neurotycho.org ). The mining of this type of data is hindered by lack of specialized procedures to deal with: (1) Severe EECoG artifacts due to the experimental produces; (2) Sophisticated forward models that account for surgery induced skull defects and implanted ECoG electrode strips; (3) Reliable statistical procedures to estimate and compare source connectivity (partial correlation). We provide solutions to the processing issues just mentioned with EECoG-Comp: an open source platform ( https://github.com/Vincent-wq/EECoG-Comp ). EECoG lead fields calculated with FEM (Simbio) for MDR data are also provided and were used in other papers of this special issue. As a use case with the MDR, we show: (1) For real MDR data, 4 popular ESI methods (MNE, LCMV, eLORETA and SSBL) showed significant but moderate concordance with a usual standard, the ECoG Laplacian (standard partial [Formula: see text]); (2) In both monkey and human simulations, all ESI methods as well as Laplacian had a significant but poor correspondence with the true source connectivity. These preliminary results may stimulate the development of improved ESI connectivity estimators but require the availability of more EECoG data sets to obtain neurobiologically valid inferences.

Entities:  

Keywords:  Connectivity; ECoG; EEG; Electrophysiological source imaging; Forward modeling; Monkey electrophysiology; Open science

Mesh:

Year:  2019        PMID: 31209695      PMCID: PMC6592977          DOI: 10.1007/s10548-019-00708-w

Source DB:  PubMed          Journal:  Brain Topogr        ISSN: 0896-0267            Impact factor:   3.020


  39 in total

Review 1.  Functional and effective connectivity: a review.

Authors:  Karl J Friston
Journal:  Brain Connect       Date:  2011

2.  Analyzing a portion of the ROC curve.

Authors:  D K McClish
Journal:  Med Decis Making       Date:  1989 Jul-Sep       Impact factor: 2.583

3.  Dissociated multi-unit activity and local field potentials: a theory inspired analysis of a motor decision task.

Authors:  Maurizio Mattia; Stefano Ferraina; Paolo Del Giudice
Journal:  Neuroimage       Date:  2010-01-25       Impact factor: 6.556

4.  A study of dipole localization accuracy for MEG and EEG using a human skull phantom.

Authors:  R M Leahy; J C Mosher; M E Spencer; M X Huang; J D Lewine
Journal:  Electroencephalogr Clin Neurophysiol       Date:  1998-08

5.  A new method for quantifying the performance of EEG blind source separation algorithms by referencing a simultaneously recorded ECoG signal.

Authors:  Naoya Oosugi; Keiichi Kitajo; Naomi Hasegawa; Yasuo Nagasaka; Kazuo Okanoya; Naotaka Fujii
Journal:  Neural Netw       Date:  2017-01-29

6.  Mapping Brain Activity with Electrocorticography: Resolution Properties and Robustness of Inverse Solutions.

Authors:  Chiara Todaro; Laura Marzetti; Pedro A Valdés Sosa; Pedro A Valdés-Hernandez; Vittorio Pizzella
Journal:  Brain Topogr       Date:  2018-01-23       Impact factor: 3.020

7.  Interpreting magnetic fields of the brain: minimum norm estimates.

Authors:  M S Hämäläinen; R J Ilmoniemi
Journal:  Med Biol Eng Comput       Date:  1994-01       Impact factor: 2.602

8.  Atlas of the normal intracranial electroencephalogram: neurophysiological awake activity in different cortical areas.

Authors:  Birgit Frauscher; Nicolas von Ellenrieder; Rina Zelmann; Irena Doležalová; Lorella Minotti; André Olivier; Jeffery Hall; Dominique Hoffmann; Dang Khoa Nguyen; Philippe Kahane; François Dubeau; Jean Gotman
Journal:  Brain       Date:  2018-04-01       Impact factor: 13.501

Review 9.  Electrophysiological imaging of brain activity and connectivity-challenges and opportunities.

Authors:  Bin He; Lin Yang; Christopher Wilke; Han Yuan
Journal:  IEEE Trans Biomed Eng       Date:  2011-04-07       Impact factor: 4.538

10.  Brainstorm: a user-friendly application for MEG/EEG analysis.

Authors:  François Tadel; Sylvain Baillet; John C Mosher; Dimitrios Pantazis; Richard M Leahy
Journal:  Comput Intell Neurosci       Date:  2011-04-13
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