Literature DB >> 31203024

A new blind source separation framework for signal analysis and artifact rejection in functional Near-Infrared Spectroscopy.

Alexander von Lühmann1, Zois Boukouvalas2, Klaus-Robert Müller3, Tülay Adalı4.   

Abstract

In the analysis of functional Near-Infrared Spectroscopy (fNIRS) signals from real-world scenarios, artifact rejection is essential. However, currently there exists no gold-standard. Although a plenitude of methodological approaches implicitly assume the presence of latent processes in the signals, elaborate Blind-Source-Separation methods have rarely been applied. A reason are challenging characteristics such as Non-instantaneous and non-constant coupling, correlated noise and statistical dependencies between signal components. We present a novel suitable BSS framework that tackles these issues by incorporating A) Independent Component Analysis methods that exploit both higher order statistics and sample dependency, B) multimodality, i.e., fNIRS with accelerometer signals, and C) Canonical-Correlation Analysis with temporal embedding. This enables analysis of signal components and rejection of motion-induced physiological hemodynamic artifacts that would otherwise be hard to identify. We implement a method for Blind Source Separation and Accelerometer based Artifact Rejection and Detection (BLISSA2RD). It allows the analysis of a novel n-back based cognitive workload paradigm in freely moving subjects, that is also presented in this manuscript. We evaluate on the corresponding data set and simulated ground truth data, making use of metrics based on 1st and 2nd order statistics and SNR and compare with three established methods: PCA, Spline and Wavelet-based artifact removal. Across 17 subjects, the method is shown to reduce movement induced artifacts by up to two orders of magnitude, improves the SNR of continuous hemodynamic signals in single channels by up to 10dB, and significantly outperforms conventional methods in the extraction of simulated Hemodynamic Response Functions from strongly contaminated data. The framework and methods presented can serve as an introduction to a new type of multivariate methods for the analysis of fNIRS signals and as a blueprint for artifact rejection in complex environments beyond the applied paradigm.
Copyright © 2019 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Artifact removal; Blind source separation; Entropy rate bound minimization; Machine learning; Multimodality; Neuroimaging in motion; fNIRS

Mesh:

Year:  2019        PMID: 31203024     DOI: 10.1016/j.neuroimage.2019.06.021

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  13 in total

1.  Multivariate Kalman filter regression of confounding physiological signals for real-time classification of fNIRS data.

Authors:  Antonio Ortega-Martinez; Alexander Von Lühmann; Parya Farzam; De'Ja Rogers; Emily M Mugler; David A Boas; Meryem A Yücel
Journal:  Neurophotonics       Date:  2022-06-08       Impact factor: 4.212

2.  Towards Neuroscience of the Everyday World (NEW) using functional Near-Infrared Spectroscopy.

Authors:  Alexander von Lühmann; Yilei Zheng; Antonio Ortega-Martinez; Swathi Kiran; David C Somers; Alice Cronin-Golomb; Louis N Awad; Terry D Ellis; David A Boas; Meryem A Yücel
Journal:  Curr Opin Biomed Eng       Date:  2021-02-03

3.  A technical review of canonical correlation analysis for neuroscience applications.

Authors:  Xiaowei Zhuang; Zhengshi Yang; Dietmar Cordes
Journal:  Hum Brain Mapp       Date:  2020-06-27       Impact factor: 5.038

4.  Open Access Multimodal fNIRS Resting State Dataset With and Without Synthetic Hemodynamic Responses.

Authors:  Alexander von Lühmann; Xinge Li; Natalie Gilmore; David A Boas; Meryem A Yücel
Journal:  Front Neurosci       Date:  2020-09-29       Impact factor: 4.677

5.  NIRS-KIT: a MATLAB toolbox for both resting-state and task fNIRS data analysis.

Authors:  Xin Hou; Zong Zhang; Chen Zhao; Lian Duan; Yilong Gong; Zheng Li; Chaozhe Zhu
Journal:  Neurophotonics       Date:  2021-01-25       Impact factor: 3.593

6.  Improved physiological noise regression in fNIRS: A multimodal extension of the General Linear Model using temporally embedded Canonical Correlation Analysis.

Authors:  Alexander von Lühmann; Xinge Li; Klaus-Robert Müller; David A Boas; Meryem A Yücel
Journal:  Neuroimage       Date:  2019-12-20       Impact factor: 6.556

7.  Leaf-inspired homeostatic cellulose biosensors.

Authors:  Ji-Yong Kim; Yong Ju Yun; Joshua Jeong; C-Yoon Kim; Klaus-Robert Müller; Seong-Whan Lee
Journal:  Sci Adv       Date:  2021-04-16       Impact factor: 14.136

8.  Characterizing reproducibility of cerebral hemodynamic responses when applying short-channel regression in functional near-infrared spectroscopy.

Authors:  Dominik G Wyser; Christoph M Kanzler; Lena Salzmann; Olivier Lambercy; Martin Wolf; Felix Scholkmann; Roger Gassert
Journal:  Neurophotonics       Date:  2022-03-07       Impact factor: 4.212

9.  Motor Imagery Under Distraction- An Open Access BCI Dataset.

Authors:  Stephanie Brandl; Benjamin Blankertz
Journal:  Front Neurosci       Date:  2020-10-19       Impact factor: 4.677

10.  NIRS-ICA: A MATLAB Toolbox for Independent Component Analysis Applied in fNIRS Studies.

Authors:  Yang Zhao; Pei-Pei Sun; Fu-Lun Tan; Xin Hou; Chao-Zhe Zhu
Journal:  Front Neuroinform       Date:  2021-07-14       Impact factor: 4.081

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