Literature DB >> 31200185

Metazoan DNA replication origins.

Olivier Ganier1, Paulina Prorok1, Ildem Akerman1, Marcel Méchali2.   

Abstract

DNA replication starts with the opening of DNA at sites called DNA replication origins. From the single sequence-specific DNA replication origin of the small Escherichia coli genome, up to thousands of origins that are necessary to replicate the large human genome, strict sequence specificity has been lost. Nevertheless, genome-wide analyses performed in the recent years, using different mapping methods, demonstrated that there are precise locations along the metazoan genome from which replication initiates. These sites contain relaxed sequence consensus and epigenetic features. There is flexibility in the choice of origins to be used during a given cell cycle, probably imposed by evolution and developmental constraints. Here, we will briefly describe their main features.
Copyright © 2019 Elsevier Ltd. All rights reserved.

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Year:  2019        PMID: 31200185     DOI: 10.1016/j.ceb.2019.03.003

Source DB:  PubMed          Journal:  Curr Opin Cell Biol        ISSN: 0955-0674            Impact factor:   8.382


  16 in total

Review 1.  Preparation for DNA replication: the key to a successful S phase.

Authors:  Juanita C Limas; Jeanette Gowen Cook
Journal:  FEBS Lett       Date:  2019-10-15       Impact factor: 4.124

2.  AT the Onset of DNA Replication in Arabidopsis.

Authors:  Anne-Sophie Fiorucci
Journal:  Plant Physiol       Date:  2020-05       Impact factor: 8.340

3.  Polo-like kinase 1 (Plk1) is a positive regulator of DNA replication in the Xenopus in vitro system.

Authors:  Diletta Ciardo; Olivier Haccard; Hemalatha Narassimprakash; Virginie Chiodelli; Arach Goldar; Kathrin Marheineke
Journal:  Cell Cycle       Date:  2020-06-23       Impact factor: 4.534

4.  Polo-like kinase 1 (Plk1) regulates DNA replication origin firing and interacts with Rif1 in Xenopus.

Authors:  Diletta Ciardo; Olivier Haccard; Hemalatha Narassimprakash; David Cornu; Ida Chiara Guerrera; Arach Goldar; Kathrin Marheineke
Journal:  Nucleic Acids Res       Date:  2021-09-27       Impact factor: 16.971

5.  Escherichia coli cell factories with altered chromosomal replication scenarios exhibit accelerated growth and rapid biomass production.

Authors:  Hee Jin Yang; Kitae Kim; Soon-Kyeong Kwon; Jihyun F Kim
Journal:  Microb Cell Fact       Date:  2022-06-21       Impact factor: 6.352

6.  Dynamics of replication origin over-activation.

Authors:  Haiqing Fu; Christophe E Redon; Bhushan L Thakur; Koichi Utani; Robin Sebastian; Sang-Min Jang; Jacob M Gross; Sara Mosavarpour; Anna B Marks; Sophie Z Zhuang; Sarah B Lazar; Mishal Rao; Shira T Mencer; Adrian M Baris; Lorinc S Pongor; Mirit I Aladjem
Journal:  Nat Commun       Date:  2021-06-08       Impact factor: 14.919

7.  Efficient and strand-specific profiling of replicating chromatin with enrichment and sequencing of protein-associated nascent DNA in mammalian cells.

Authors:  Zhiming Li; Xu Hua; Albert Serra-Cardona; Xiaowei Xu; Zhiguo Zhang
Journal:  Nat Protoc       Date:  2021-04-28       Impact factor: 17.021

Review 8.  Replication initiation: Implications in genome integrity.

Authors:  Yo-Chuen Lin; Supriya G Prasanth
Journal:  DNA Repair (Amst)       Date:  2021-05-11

9.  An evolutionary model identifies the main evolutionary biases for the evolution of genome-replication profiles.

Authors:  Rossana Droghetti; Nicolas Agier; Gilles Fischer; Marco Gherardi; Marco Cosentino Lagomarsino
Journal:  Elife       Date:  2021-05-20       Impact factor: 8.140

10.  Genome-wide mapping of human DNA replication by optical replication mapping supports a stochastic model of eukaryotic replication.

Authors:  Weitao Wang; Kyle N Klein; Karel Proesmans; Hongbo Yang; Claire Marchal; Xiaopeng Zhu; Tyler Borrman; Alex Hastie; Zhiping Weng; John Bechhoefer; Chun-Long Chen; David M Gilbert; Nicholas Rhind
Journal:  Mol Cell       Date:  2021-06-21       Impact factor: 19.328

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