Literature DB >> 31199681

Clustering of IRE1α depends on sensing ER stress but not on its RNase activity.

Daniela Ricci1, Ilaria Marrocco1, Daniel Blumenthal1, Miriam Dibos1, Daniela Eletto1, Jade Vargas1, Sarah Boyle1, Yuichiro Iwamoto1, Steven Chomistek1, James C Paton2, Adrienne W Paton2, Yair Argon1.   

Abstract

The sensors of the unfolded protein response react to endoplasmic reticulum (ER) stress by transient activation of their enzymatic activities, which initiate various signaling cascades. In addition, the sensor IRE1α exhibits stress-induced clustering in a transient time frame similar to activation of its endoRNase activity. Previous work had suggested that the clustering response and RNase activity of IRE1α are functionally linked, but here we show that they are independent of each other and have different behaviors and modes of activation. Although both clustering and the RNase activity are responsive to luminal stress conditions and to depletion of the ER chaperone binding protein, RNase-inactive IRE1α still clusters and, conversely, full RNase activity can be accomplished without clustering. The clusters formed by RNase-inactive IRE1α are much larger and persist longer than those induced by ER stress. Clustering requires autophosphorylation, and an IRE1α mutant whose RNase domain is responsive to ligands that bind the kinase domain forms yet a third type of stress-independent cluster, with distinct physical properties and half-lives. These data suggest that IRE1α clustering can follow distinct pathways upon activation of the sensor.-Ricci, D., Marrocco, I., Blumenthal, D., Dibos, M., Eletto, D., Vargas, J., Boyle, S., Iwamoto, Y., Chomistek, S., Paton, J. C., Paton, A. W., Argon, Y. Clustering of IRE1α depends on sensing ER stress but not on its RNase activity.

Entities:  

Keywords:  BiP; autophosphorylation; differential ER Stress; luteolin

Mesh:

Substances:

Year:  2019        PMID: 31199681      PMCID: PMC6704461          DOI: 10.1096/fj.201801240RR

Source DB:  PubMed          Journal:  FASEB J        ISSN: 0892-6638            Impact factor:   5.191


  71 in total

1.  Dynamic interaction of BiP and ER stress transducers in the unfolded-protein response.

Authors:  A Bertolotti; Y Zhang; L M Hendershot; H P Harding; D Ron
Journal:  Nat Cell Biol       Date:  2000-06       Impact factor: 28.824

2.  The molecular basis for selective inhibition of unconventional mRNA splicing by an IRE1-binding small molecule.

Authors:  Benedict C S Cross; Peter J Bond; Pawel G Sadowski; Babal Kant Jha; Jaroslav Zak; Jonathan M Goodman; Robert H Silverman; Thomas A Neubert; Ian R Baxendale; David Ron; Heather P Harding
Journal:  Proc Natl Acad Sci U S A       Date:  2012-02-06       Impact factor: 11.205

3.  Membrane lipid saturation activates IRE1α without inducing clustering.

Authors:  Yuto Kitai; Hiroyuki Ariyama; Nozomu Kono; Daisuke Oikawa; Takao Iwawaki; Hiroyuki Arai
Journal:  Genes Cells       Date:  2013-06-27       Impact factor: 1.891

4.  The endoribonuclease activity of mammalian IRE1 autoregulates its mRNA and is required for the unfolded protein response.

Authors:  W Tirasophon; K Lee; B Callaghan; A Welihinda; R J Kaufman
Journal:  Genes Dev       Date:  2000-11-01       Impact factor: 11.361

5.  Mammalian endoplasmic reticulum stress sensor IRE1 signals by dynamic clustering.

Authors:  Han Li; Alexei V Korennykh; Shannon L Behrman; Peter Walter
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-26       Impact factor: 11.205

6.  The Sec61 translocon limits IRE1α signaling during the unfolded protein response.

Authors:  Arunkumar Sundaram; Rachel Plumb; Suhila Appathurai; Malaiyalam Mariappan
Journal:  Elife       Date:  2017-05-15       Impact factor: 8.140

7.  Dynamic changes in complexes of IRE1α, PERK, and ATF6α during endoplasmic reticulum stress.

Authors:  Arunkumar Sundaram; Suhila Appathurai; Rachel Plumb; Malaiyalam Mariappan
Journal:  Mol Biol Cell       Date:  2018-04-10       Impact factor: 4.138

8.  Regulated Ire1-dependent decay of messenger RNAs in mammalian cells.

Authors:  Julie Hollien; Jonathan H Lin; Han Li; Nicole Stevens; Peter Walter; Jonathan S Weissman
Journal:  J Cell Biol       Date:  2009-08-03       Impact factor: 10.539

9.  A new family of potent AB(5) cytotoxins produced by Shiga toxigenic Escherichia coli.

Authors:  Adrienne W Paton; Potjanee Srimanote; Ursula M Talbot; Hui Wang; James C Paton
Journal:  J Exp Med       Date:  2004-06-28       Impact factor: 14.307

10.  The unfolded protein response signals through high-order assembly of Ire1.

Authors:  Alexei V Korennykh; Pascal F Egea; Andrei A Korostelev; Janet Finer-Moore; Chao Zhang; Kevan M Shokat; Robert M Stroud; Peter Walter
Journal:  Nature       Date:  2008-12-14       Impact factor: 49.962

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  14 in total

1.  Dynamics and clustering of IRE1α during ER stress.

Authors:  T Kelly Rainbolt; Judith Frydman
Journal:  Proc Natl Acad Sci U S A       Date:  2020-02-04       Impact factor: 11.205

2.  Decoding non-canonical mRNA decay by the endoplasmic-reticulum stress sensor IRE1α.

Authors:  Adrien Le Thomas; Elena Ferri; Scot Marsters; Jonathan M Harnoss; David A Lawrence; Iratxe Zuazo-Gaztelu; Zora Modrusan; Sara Chan; Margaret Solon; Cécile Chalouni; Weihan Li; Hartmut Koeppen; Joachim Rudolph; Weiru Wang; Thomas D Wu; Peter Walter; Avi Ashkenazi
Journal:  Nat Commun       Date:  2021-12-15       Impact factor: 14.919

Review 3.  Dynamic regulation of mitochondrial-endoplasmic reticulum crosstalk during stem cell homeostasis and aging.

Authors:  Weiping Lin; Shuxun Chen; Yan Wang; Ming Wang; Wayne Yuk-Wai Lee; Xiaohua Jiang; Gang Li
Journal:  Cell Death Dis       Date:  2021-08-16       Impact factor: 8.469

4.  Live imaging of the co-translational recruitment of XBP1 mRNA to the ER and its processing by diffuse, non-polarized IRE1α.

Authors:  Silvia Gómez-Puerta; Roberto Ferrero; Tobias Hochstoeger; Ivan Zubiri; Jeffrey Chao; Tomás Aragón; Franka Voigt
Journal:  Elife       Date:  2022-06-22       Impact factor: 8.713

5.  Assays to Study IRE1 Activation and Signaling.

Authors:  Paloma Moraga; Raul Aravena; Hery Urra; Claudio Hetz
Journal:  Methods Mol Biol       Date:  2022

6.  Endoplasmic reticulum stress activates human IRE1α through reversible assembly of inactive dimers into small oligomers.

Authors:  Vladislav Belyy; Iratxe Zuazo-Gaztelu; Andrew Alamban; Avi Ashkenazi; Peter Walter
Journal:  Elife       Date:  2022-06-22       Impact factor: 8.713

7.  The stress-sensing domain of activated IRE1α forms helical filaments in narrow ER membrane tubes.

Authors:  Ngoc-Han Tran; Stephen D Carter; Ann De Mazière; Avi Ashkenazi; Judith Klumperman; Peter Walter; Grant J Jensen
Journal:  Science       Date:  2021-09-30       Impact factor: 63.714

8.  Sensor dimer disruption as a new mode of action to block the IRE1-mediated unfolded protein response.

Authors:  Kosala N Amarasinghe; Diana Pelizzari-Raymundo; Antonio Carlesso; Eric Chevet; Leif A Eriksson; Sayyed Jalil Mahdizadeh
Journal:  Comput Struct Biotechnol J       Date:  2022-03-29       Impact factor: 6.155

9.  Quantitative microscopy reveals dynamics and fate of clustered IRE1α.

Authors:  Vladislav Belyy; Ngoc-Han Tran; Peter Walter
Journal:  Proc Natl Acad Sci U S A       Date:  2019-12-23       Impact factor: 11.205

Review 10.  Mechanism of Hsp70 specialized interactions in protein translocation and the unfolded protein response.

Authors:  Natacha Larburu; Christopher J Adams; Chao-Sheng Chen; Piotr R Nowak; Maruf M U Ali
Journal:  Open Biol       Date:  2020-08-19       Impact factor: 6.411

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