| Literature DB >> 31190883 |
Chenyao Xie1, Jing Zhao1, Wenxi Hua2, Pei Tan1, Yudi Chen1, Jingwen Rui2, Xiaohan Sun1, Jiaying Fan1, Xiangyu Wei1, Xiaojing Xu1, Xiaoqin Yang1.
Abstract
Objective: As an important DNA repair gene, the xeroderma pigmentosum complementation group C (XPC) gene and its functional genetic variants' relationship with chemotherapy response has been extensively studied. To quantitatively elucidate the genetic impact of the XPC rs2228000 and rs2228001 polymorphisms on the response to platinum-based chemotherapy, the present meta-analysis was conducted. Materials and methods: A systematic literature search was performed in seven cyber databases until February 20, 2019, for all relevant studies that assessed the relationship between XPC polymorphisms and the response to platinum-based chemotherapy. Odds ratios (ORs) with a 95% confidence interval (95% CI) were measured to assess the strength of the association. R programs were developed to perform the statistical analyses, including calculations of pooled estimates, publication bias and sensitivity analyses, and heterogeneity interpretations.Entities:
Keywords: XPC; meta-analysis; platinum-based chemotherapy; polymorphism
Year: 2019 PMID: 31190883 PMCID: PMC6529619 DOI: 10.2147/OTT.S202617
Source DB: PubMed Journal: Onco Targets Ther ISSN: 1178-6930 Impact factor: 4.147
Figure 1Flowchart showing the detailed processes of literature screening and study selection.
Principal characteristics of studies included in this meta-analysis
| Author (year) | Ref | Country (region) | Cancer type | Chemotherapy strategy | Criteria | NOS | Good responder | Poor responder |
|---|---|---|---|---|---|---|---|---|
| Zhu X.(2010) | [ | China(Asia) | Non-small cell lung cancer | Cisplatin/Carboplatin-based | WHO | 5 | 25 | 71 |
| Zhang F.(2010) | [ | China(Asia) | Ovarian cancer | Cisplatin/Carboplatin-based | WHO | 6 | 82 | 48 |
| Zhai Y.(2011) | [ | China(Asia) | Non-small cell lung cancer | Vinorelbine & Cisplatin | WHO | 6 | 57 | 106 |
| Sun H.(2013) | [ | China(Asia) | Ovarian cancer | Platinum-based | TFI | 4 | 139 | 73 |
| Lawania S.(2018) | [ | India (Asia) | Lung cancer | Platinum-based | RECIST | 5 | 89 | 78 |
| Mlak R.(2018) | [ | Poland(Europe) | Non-small cell lung cancer | Platinum & Gemcitabine | RECIST | 4 | 17 | 73 |
| Wang L.(2010) | [ | China(Asia) | Ovarian cancer | Cisplatin-based | WHO | 6 | 41 | 22 |
| Zhu X.(2010) | [ | China(Asia) | Non-small cell lung cancer | Cisplatin/Carboplatin-based | WHO | 5 | 27 | 69 |
| Zhang F.(2010) | [ | China(Asia) | Ovarian cancer | Cisplatin/Carboplatin-based | WHO | 6 | 82 | 48 |
| Zhai Y.(2011) | [ | China(Asia) | Non-small cell lung cancer | Vinorelbine & Cisplatin | WHO | 6 | 57 | 106 |
| Sun X.(2013) | [ | China(Asia) | Bone malignant tumor | Cisplatin-based | EORTC | 6 | 94 | 88 |
| Sun H.(2013) | [ | China(Asia) | Ovarian cancer | Platinum-based | TFI | 5 | 140 | 73 |
| Xue M.(2015) | [ | China(Asia) | Gastric cancer | FOLFOX | RECIST | 7 | 269 | 141 |
| Qi L.(2016) | [ | China(Asia) | Cervical cancer | Cisplatin-based | RECIST | 6 | 78 | 36 |
| Lawania S.(2018) | [ | India (Asia) | Lung cancer | Platinum-based | RECIST | 5 | 89 | 78 |
| Mlak R.(2018) | [ | Poland(Europe) | Non-small cell lung cancer | Platinum & Gemcitabine | RECIST | 4 | 15 | 62 |
Abbreviations: FOLFOX, combination of Leucovorin Calcium (Folinic Acid), Fluorouracil and Oxaliplatin; RECIST, response evaluation criteria in solid tumors; TFI, treatment-free interval; EORTC, evaluation criteria from European Organization for Research and Treatment of Cancer; WHO response evaluation criteria introduced by the World Health Organization; NOS, The Newcastle–Ottawa Scale score.
Figure 2Forest plot showing the association between the XPC rs2228000 polymorphism and the response to platinum-based chemotherapy. The odds ratio (OR) and corresponding 95% confidence interval (95% CI) were calculated under the dominant model. Involved studies were stratified according to cancer type. Each study was labeled with the name of the author and the year of publication. The area of the gray box represents the weight of the sample size assigned under the fixed effect model. The lateral points of the gray diamond icon represent the upper and lower bounds of a 95% CI, while the vertical points indicate the point estimate. The solid vertical line represents the null effect (OR=1). A represents the major allele, and a represents the minor allele.
Association between the XPC rs2228000 polymorphism and the response to platinum-based chemotherapy
| Homozygote model | Heterozygote model | Dominant model | Recessive model | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OR (95% CI) | OR (95% CI) | OR (95% CI) | OR (95% CI) | |||||||||
| Overall | 1.46 [0.84, 2.54] | 0.18 | 0.43 | 1.23 [0.90, 1.67] | 0.19 | 0.58 | 1.27 [0.95, 1.70] | 0.11 | 0.67 | 1.35 [0.80, 2.29] | 0.26 | 0.25 |
| Sample size | ||||||||||||
| ≥200 | 0.97 [0.42, 2.24] | 0.93 | NA | 1.21 [0.65, 2.26] | 0.55 | NA | 1.13 [0.64, 2.00] | 0.66 | NA | 0.89 [0.40, 1.99] | 0.78 | NA |
| <200 | 2.01 [0.96, 4.20] | 0.06 | 0.53 | 1.23 [0.86, 1.76] | 0.25 | 0.44 | 1.32 [0.94, 1.86] | 0.11 | 0.56 | 1.85 [0.92, 3.71] | 0.08 | 0.34 |
| Criteria | ||||||||||||
| WHO/RECIST | 2.01 [0.96, 4.20] | 0.06 | 0.53 | 1.23 [0.86, 1.76] | 0.25 | 0.44 | 1.32 [0.94, 1.86] | 0.11 | 0.56 | 1.85 [0.92, 3.71] | 0.08 | 0.34 |
| Others | 0.97 [0.42, 2.24] | 0.93 | NA | 1.21[0.65, 2.26] | 0.55 | NA | 1.13 [0.64, 2.00] | 0.66 | NA | 0.89 [0.40, 1.99] | 0.78 | NA |
| Cancer type | ||||||||||||
| Lung cancer | 1.38 [0.54, 3.54] | 0.50 | 0.53 | 1.23 [0.83, 1.84] | 0.30 | 0.29 | 1.25 [0.85, 1.85] | 0.26 | 0.45 | 1.29 [0.53, 3.11] | 0.57 | 0.28 |
| Others | 1.50 [0.75, 2.99] | 0.25 | 0.10 | 1.22 [0.75, 1.98] | 0.43 | 0.98 | 1.29 [0.83, 2.02] | 0.26 | 0.46 | 1.57 [0.43, 5.71] | 0.50 | 0.09 |
| Country | ||||||||||||
| China | 1.52 [0.84, 2.77] | 0.16 | 0.21 | 1.34 [0.92, 1.95] | 0.12 | 0.40 | 1.40 [0.99, 1.99] | 0.06 | 0.55 | 1.40 [0.79, 2.46] | 0.25 | 0.10 |
| Others | 1.08 [0.23, 5.14] | 0.93 | 0.62 | 1.00 [0.58, 1.75] | 0.99 | 0.70 | 1.00 [0.58, 1.72] | 0.99 | 0.82 | 1.05 [0.23, 4.86] | 0.95 | 0.58 |
Abbreviations: OR, odds ratio; CI, confidence interval; RECIST, Response Evaluation Criteria In Solid Tumors; WHO response evaluation criteria introduced by the World Health Organization; Ph, P-value for heterogeneity test; NA, not applicable.
Figure 3Forest plot showing the association between the XPC rs2228001 polymorphism and the response to platinum-based chemotherapy. The odds ratio (OR) and corresponding 95% confidence interval (95% CI) were calculated under the dominant model. Involved studies were stratified according to cancer type. Each study was labeled with the name of the author and the year of publication. The area of the gray box represents the weight of the sample size assigned under the fixed effect model. The lateral points of the gray diamond icon represent the upper and lower bounds of a 95% CI, while the vertical points indicate the point estimate. The solid vertical line represents the null effect (OR=1). A represents the major allele, and a represents the minor allele.
Association between the XPC rs2228001 polymorphism and the response to platinum-based chemotherapy
| Homozygote model | Heterozygote model | Dominant model | Recessive model | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OR (95% CI) | OR (95% CI) | OR (95% CI) | OR (95% CI) | |||||||||
| Overall | 0.84 [0.53, 1.32] | 0.44 | 0.07 | 0.83 [0.54, 1.27] | 0.39 | 0.01 | 0.87 [0.60, 1.27] | 0.47 | <0.01 | 0.99[0.75, 1.32] | 0.95 | 0.21 |
| Sample size | ||||||||||||
| ≥200 | 0.90 [0.27, 3.05] | 0.87 | 0.02 | 0.93 [0.34, 2.56] | 0.89 | 0.01 | 0.92 [0.32, 2.69] | 0.88 | <0.01 | 1.07 [0.69, 1.68] | 0.75 | 0.13 |
| <200 | 0.79 [0.52, 1.20] | 0.28 | 0.23 | 0.78 [0.46, 1.31] | 0.34 | 0.04 | 0.85 [0.56, 1.29] | 0.44 | 0.06 | 0.94 [0.65, 1.36] | 0.73 | 0.21 |
| Criteria | ||||||||||||
| WHO/RECIST | 0.85 [0.49, 1.48] | 0.57 | 0.08 | 0.83 [0.49, 1.42] | 0.50 | 0.01 | 0.89 [0.57, 1.39] | 0.61 | 0.01 | 1.03 [0.74, 1.43] | 0.86 | 0.15 |
| Others | 0.75 [0.40, 1.41] | 0.37 | 0.11 | 0.72 [0.44, 1.20] | 0.21 | 0.17 | 0.79 [0.34, 1.82] | 0.58 | 0.07 | 0.88 [0.49, 1.57] | 0.66 | 0.28 |
| Cancer type | ||||||||||||
| Lung cancer | 0.77 [0.43, 1.36] | 0.37 | 0.44 | 0.59 [0.22, 1.55] | 0.28 | <0.01 | 0.66 [0.29, 1.52] | 0.33 | 0.01 | 1.00 [0.60, 1.66] | 1.00 | 0.70 |
| Others | 0.88 [0.44, 1.76] | 0.72 | 0.02 | 1.04[0.76, 1.41] | 0.82 | 0.16 | 0.99 [0.66, 1.49] | 0.96 | 0.08 | 0.95 [0.54, 1.66] | 0.85 | 0.05 |
| Country | ||||||||||||
| China | 0.85 [0.48, 1.51] | 0.58 | 0.03 | 0.86 [0.53, 1.40] | 0.54 | 0.01 | 0.89 [0.58, 1.38] | 0.61 | <0.01 | 0.97 [0.71, 1.34] | 0.87 | 0.13 |
| Others | 0.78 [0.36, 1.67] | 0.52 | 0.58 | 0.54 [0.10, 2.84] | 0.46 | 0.08 | 0.86 [0.47, 1.57] | 0.62 | 0.23 | 1.06 [0.56, 2.00] | 0.86 | 0.32 |
Note: OR, odds ratio; CI, confidence interval; RECIST, Response Evaluation Criteria In Solid Tumors; WHO response evaluation criteria introduced by the World Health Organization; Ph, P-value for heterogeneity test.
Figure 4Funnel plot of the meta-analysis for the XPC rs2228000 polymorphism under the dominant model. Each gray square represents an included dataset. The vertical dashed line indicates the pooled odds ratio. The funnel defined by the two crossed dashed lines represents the pseudo 95% confidence interval.
Figure 5Funnel plot of the meta-analysis for the XPC rs2228001 polymorphism under the dominant model. Each gray square represents an included dataset. The vertical dashed line indicates the pooled odds ratio. The funnel defined by the two crossed dashed lines represents the pseudo 95% confidence interval.