Literature DB >> 31190329

Light-level geolocator analyses: A user's guide.

Simeon Lisovski1, Silke Bauer1, Martins Briedis1, Sarah C Davidson2,3,4,5, Kiran L Dhanjal-Adams1, Michael T Hallworth6, Julia Karagicheva7, Christoph M Meier1, Benjamin Merkel8, Janne Ouwehand9, Lykke Pedersen10, Eldar Rakhimberdiev9,11, Amélie Roberto-Charron12, Nathaniel E Seavy13, Michael D Sumner14, Caz M Taylor15, Simon J Wotherspoon16, Eli S Bridge17.   

Abstract

Light-level geolocator tags use ambient light recordings to estimate the whereabouts of an individual over the time it carried the device. Over the past decade, these tags have emerged as an important tool and have been used extensively for tracking animal migrations, most commonly small birds. Analysing geolocator data can be daunting to new and experienced scientists alike. Over the past decades, several methods with fundamental differences in the analytical approach have been developed to cope with the various caveats and the often complicated data. Here, we explain the concepts behind the analyses of geolocator data and provide a practical guide for the common steps encompassing most analyses - annotation of twilights, calibration, estimating and refining locations, and extraction of movement patterns - describing good practices and common pitfalls for each step. We discuss criteria for deciding whether or not geolocators can answer proposed research questions, provide guidance in choosing an appropriate analysis method and introduce key features of the newest open-source analysis tools. We provide advice for how to interpret and report results, highlighting parameters that should be reported in publications and included in data archiving. Finally, we introduce a comprehensive supplementary online manual that applies the concepts to several datasets, demonstrates the use of open-source analysis tools with step-by-step instructions and code and details our recommendations for interpreting, reporting and archiving.
© 2019 The Authors. Journal of Animal Ecology © 2019 British Ecological Society.

Keywords:  FLightR; GeoLight; Movebank; SGAT; animal tracking; archival tags; probGLS; solar geolocation

Mesh:

Year:  2019        PMID: 31190329     DOI: 10.1111/1365-2656.13036

Source DB:  PubMed          Journal:  J Anim Ecol        ISSN: 0021-8790            Impact factor:   5.091


  15 in total

1.  The genetic regulation of avian migration timing: combining candidate genes and quantitative genetic approaches in a long-distance migrant.

Authors:  Miloš Krist; Pavel Munclinger; Martins Briedis; Peter Adamík
Journal:  Oecologia       Date:  2021-05-07       Impact factor: 3.225

2.  Sexual segregation in juvenile Antarctic fur seals.

Authors:  Kayleigh A Jones; Norman Ratcliffe; Stephen C Votier; Simeon Lisovski; Anne-Sophie Bonnet-Lebrun; Iain J Staniland
Journal:  Oecologia       Date:  2021-07-26       Impact factor: 3.225

3.  Shorebirds wintering in Southeast Asia demonstrate trans-Himalayan flights.

Authors:  David Li; Geoffrey Davison; Simeon Lisovski; Phil F Battley; Zhijun Ma; Shufen Yang; Choon Beng How; Doug Watkins; Philip Round; Alex Yee; Vupasana Srinivasan; Clarice Teo; Robert Teo; Adrian Loo; Chee Chiew Leong; Kenneth Er
Journal:  Sci Rep       Date:  2020-12-11       Impact factor: 4.379

4.  Carryover effects of long-distance avian migration are weaker than effects of breeding environment in a partially migratory bird.

Authors:  Claire Buchan; James J Gilroy; Inês Catry; Javier Bustamante; Alina D Marca; Philip W Atkinson; Juan Miguel González; Aldina M A Franco
Journal:  Sci Rep       Date:  2021-01-13       Impact factor: 4.379

5.  Migration ecology of western gray catbirds.

Authors:  Kristen A Mancuso; Megan A Fylling; Christine A Bishop; Karen E Hodges; Michael B Lancaster; Katharine R Stone
Journal:  Mov Ecol       Date:  2021-03-17       Impact factor: 3.600

6.  Migration and non-breeding ecology of the Yellow-breasted Chat Icteria virens.

Authors:  Kristen A Mancuso; Karen E Hodges; John D Alexander; Manuel Grosselet; A Michael Bezener; Luis Morales; Sarahy C Martinez; Jessica Castellanos-Labarcena; Michael A Russello; Sarah M Rockwell; Matthias E Bieber; Christine A Bishop
Journal:  J Ornithol       Date:  2021-10-15       Impact factor: 1.745

7.  Migration-tracking integrated phylogeography supports long-distance dispersal-driven divergence for a migratory bird species in the Japanese archipelago.

Authors:  Daisuke Aoki; Haruna Sakamoto; Munehiro Kitazawa; Alexey P Kryukov; Masaoki Takagi
Journal:  Ecol Evol       Date:  2021-05-02       Impact factor: 2.912

8.  Wind-assisted sprint migration in northern swifts.

Authors:  Susanne Åkesson; Giuseppe Bianco
Journal:  iScience       Date:  2021-05-20

9.  So far, so good… Similar fitness consequences and overall energetic costs for short and long-distance migrants in a seabird.

Authors:  David Pelletier; Yannick Seyer; Stefan Garthe; Salomé Bonnefoi; Richard A Phillips; Magella Guillemette
Journal:  PLoS One       Date:  2020-03-16       Impact factor: 3.240

10.  A green wave of saltmarsh productivity predicts the timing of the annual cycle in a long-distance migratory shorebird.

Authors:  Joseph A M Smith; Kevin Regan; Nathan W Cooper; Luanne Johnson; Elizabeth Olson; Ashley Green; Jeff Tash; David C Evers; Peter P Marra
Journal:  Sci Rep       Date:  2020-11-26       Impact factor: 4.996

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