Literature DB >> 31190039

Molecular dynamics study of nanoconfined TIP4P/2005 water: how confinement and temperature affect diffusion and viscosity.

A Zaragoza1, M A Gonzalez2, L Joly3, I López-Montero4, M A Canales5, A L Benavides6, C Valeriani7.   

Abstract

In the past few decades great effort has been devoted to the study of water confined in hydrophobic geometries at the nanoscale (tubes and slit pores) due to the multiple technological applications of such systems, ranging from drug delivery to water desalination devices. To our knowledge, neither numerical/theoretical nor experimental approaches have so far reached a consensual understanding of structural and transport properties of water under these conditions. In this work, we present molecular dynamics simulations of TIP4P/2005 water under different nanoconfinements (slit pores or nanotubes, with two degrees of hydrophobicity) within a wide temperature range. It has been found that water is more structured near the less hydrophobic walls, independently of the confining geometries. Meanwhile, we observe an enhanced diffusion coefficient of water in both hydrophobic nanotubes. Finally, we propose a confined Stokes-Einstein relation to obtain the viscosity from diffusivity, whose result strongly differs from the Green-Kubo expression that has been used in previous works. While viscosity computed with the Green-Kubo formula (applied for anisotropic and confined systems) strongly differs from that of the bulk, viscosity computed with the confined Stokes-Einstein relation is not so much affected by the confinement, independently of its geometry. We discuss the shortcomings of both approaches, which could explain this discrepancy.

Entities:  

Year:  2019        PMID: 31190039     DOI: 10.1039/c9cp02485a

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  7 in total

1.  Water Nanoconfined in a Hydrophobic Pore: Molecular Dynamics Simulations of Transmembrane Protein 175 and the Influence of Water Models.

Authors:  Charlotte I Lynch; Gianni Klesse; Shanlin Rao; Stephen J Tucker; Mark S P Sansom
Journal:  ACS Nano       Date:  2021-11-16       Impact factor: 15.881

Review 2.  Water in Nanopores and Biological Channels: A Molecular Simulation Perspective.

Authors:  Charlotte I Lynch; Shanlin Rao; Mark S P Sansom
Journal:  Chem Rev       Date:  2020-08-25       Impact factor: 60.622

3.  From Behavior of Water on Hydrophobic Graphene Surfaces to Ultra-Confinement of Water in Carbon Nanotubes.

Authors:  Alia Mejri; Guillaume Herlem; Fabien Picaud
Journal:  Nanomaterials (Basel)       Date:  2021-01-25       Impact factor: 5.076

4.  Nano-metering of Solvated Biomolecules Or Nanoparticles from Water Self-Diffusivity in Bio-inspired Nanopores.

Authors:  Luca Bergamasco; Matteo Alberghini; Matteo Fasano
Journal:  Nanoscale Res Lett       Date:  2019-10-28       Impact factor: 4.703

5.  In silico simulations of erythrocyte aquaporins with quantitative in vitro validation.

Authors:  Ruth Chan; Michael Falato; Huiyun Liang; Liao Y Chen
Journal:  RSC Adv       Date:  2020-06-04       Impact factor: 4.036

6.  Quantitative study of unsaturated transport of glycerol through aquaglyceroporin that has high affinity for glycerol.

Authors:  Roberto A Rodriguez; Ruth Chan; Huiyun Liang; Liao Y Chen
Journal:  RSC Adv       Date:  2020-09-15       Impact factor: 4.036

7.  Flow of long chain hydrocarbons through carbon nanotubes (CNTs).

Authors:  Pranay Asai; Palash Panja; Raul Velasco; Milind Deo
Journal:  Sci Rep       Date:  2021-05-26       Impact factor: 4.379

  7 in total

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