Literature DB >> 31189600

Correlated protein conformational states and membrane dynamics during attack by pore-forming toxins.

Ilanila I Ponmalar1, Ramesh Cheerla2, K Ganapathy Ayappa3,2, Jaydeep K Basu4.   

Abstract

Pore-forming toxins (PFTs) are a class of proteins implicated in a wide range of virulent bacterial infections and diseases. These toxins bind to target membranes and subsequently oligomerize to form functional pores that eventually lead to cell lysis. While the protein undergoes large conformational changes on the bilayer, the connection between intermediate oligomeric states and lipid reorganization during pore formation is largely unexplored. Cholesterol-dependent cytolysins (CDCs) are a subclass of PFTs widely implicated in food poisoning and other related infections. Using a prototypical CDC, listeriolysin O (LLO), we provide a microscopic connection between pore formation, lipid dynamics, and leakage kinetics by using a combination of Förster resonance energy transfer (FRET) and fluorescence correlation spectroscopy (FCS) measurements on single giant unilamellar vesicles (GUVs). Upon exposure to LLO, two distinct populations of GUVs with widely different leakage kinetics emerge. We attribute these differences to the existence of oligomeric intermediates, sampling various membrane-bound conformational states of the protein, and their intimate coupling to lipid rearrangement and dynamics. Molecular dynamics simulations capture the influence of various membrane-bound conformational states on the lipid and cholesterol dynamics, providing molecular interpretations to the FRET and FCS experiments. Our study establishes a microscopic connection between membrane binding and conformational changes and their influence on lipid reorganization during PFT-mediated cell lysis. Additionally, our study provides insights into membrane-mediated protein interactions widely implicated in cell signaling, fusion, folding, and other biomolecular processes.

Entities:  

Keywords:  Förster resonance energy transfer; fluorescence correlation spectroscopy; giant unilamellar vesicle; pore-forming toxin

Mesh:

Substances:

Year:  2019        PMID: 31189600      PMCID: PMC6600976          DOI: 10.1073/pnas.1821897116

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  34 in total

Review 1.  The use of FRET imaging microscopy to detect protein-protein interactions and protein conformational changes in vivo.

Authors:  K Truong; M Ikura
Journal:  Curr Opin Struct Biol       Date:  2001-10       Impact factor: 6.809

2.  Interactions of the designed antimicrobial peptide MB21 and truncated dermaseptin S3 with lipid bilayers: molecular-dynamics simulations.

Authors:  Craig M Shepherd; Hans J Vogel; D Peter Tieleman
Journal:  Biochem J       Date:  2003-02-15       Impact factor: 3.857

3.  Single-molecule fluorescence resonance energy transfer reveals a dynamic equilibrium between closed and open conformations of syntaxin 1.

Authors:  M Margittai; J Widengren; E Schweinberger; G F Schröder; S Felekyan; E Haustein; M König; D Fasshauer; H Grubmüller; R Jahn; C A M Seidel
Journal:  Proc Natl Acad Sci U S A       Date:  2003-12-10       Impact factor: 11.205

Review 4.  Pore-forming protein toxins: from structure to function.

Authors:  Michael W Parker; Susanne C Feil
Journal:  Prog Biophys Mol Biol       Date:  2005-05       Impact factor: 3.667

5.  Imaging alpha-hemolysin with molecular dynamics: ionic conductance, osmotic permeability, and the electrostatic potential map.

Authors:  Aleksij Aksimentiev; Klaus Schulten
Journal:  Biophys J       Date:  2005-03-11       Impact factor: 4.033

6.  The domains of a cholesterol-dependent cytolysin undergo a major FRET-detected rearrangement during pore formation.

Authors:  Rajesh Ramachandran; Rodney K Tweten; Arthur E Johnson
Journal:  Proc Natl Acad Sci U S A       Date:  2005-05-06       Impact factor: 11.205

7.  FRET analysis of protein conformational change through position-specific incorporation of fluorescent amino acids.

Authors:  Daisuke Kajihara; Ryoji Abe; Issei Iijima; Chie Komiyama; Masahiko Sisido; Takahiro Hohsaka
Journal:  Nat Methods       Date:  2006-11       Impact factor: 28.547

8.  Binding and insertion of alpha-helical anti-microbial peptides in POPC bilayers studied by molecular dynamics simulations.

Authors:  Senthil K Kandasamy; Ronald G Larson
Journal:  Chem Phys Lipids       Date:  2004-11       Impact factor: 3.329

9.  Giant liposomes in physiological buffer using electroformation in a flow chamber.

Authors:  Daniel J Estes; Michael Mayer
Journal:  Biochim Biophys Acta       Date:  2005-04-20

10.  Molecular topography imaging by intermembrane fluorescence resonance energy transfer.

Authors:  Amy P Wong; Jay T Groves
Journal:  Proc Natl Acad Sci U S A       Date:  2002-10-21       Impact factor: 11.205

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  2 in total

1.  Bacterial protein listeriolysin O induces nonmonotonic dynamics because of lipid ejection and crowding.

Authors:  Ilanila Ilangumaran Ponmalar; K Ganapathy Ayappa; Jaydeep K Basu
Journal:  Biophys J       Date:  2021-06-30       Impact factor: 3.699

Review 2.  Challenges and approaches to studying pore-forming proteins.

Authors:  Joshua T Benton; Charles Bayly-Jones
Journal:  Biochem Soc Trans       Date:  2021-12-17       Impact factor: 5.407

  2 in total

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