| Literature DB >> 31188929 |
Samanta Celeste Garcia-Hernandez1, Perla Meneses-Sanchez1, Leonardo Martin Porchia2, Enrique Torres-Rasgado3, Ricardo Pérez-Fuentes2,3, Martha Elba Gonzalez-Mejia1.
Abstract
Our objective was to determine the association between the methylenetetrahydrofolate reductase polymorphisms (C677T and A1298C) and the risk of developing acute lymphoblastic leukemia (ALL), chronic myeloid leukemia (CML), acute myeloid leukemia (AML), and multiple myelomas (MM) in Latinos. PubMed, SCOPUS, EBSCO, LILACS, and other Latin-specific databases were searched for case-control studies that investigated the association between these polymorphisms and hematologic malignancies until November 2017. Genotype distributions were extracted and either fixed-effects or random-effects models were used to calculate the pooled crude odds ratios (ORs) for the heterozygous, homozygous, dominant, recessive, and allelic genetic models. No publication bias was detected by the Begg-Mazumdar's test and Egger's test. From 290 publications, we identified 15 studies on the C677T polymorphism and 13 studies on the A1298C polymorphism. We observed a significant decrease in risk for the C677T polymorphism (OR range=0.54-0.75, p<0.01) and a significant increase in risk for the A1298C polymorphism (OR range=1.28-2.52, p<0.05) in developing ALL for all genetic models. No associations were determined for CML, AML, or MM for either polymorphism. This meta-analysis demonstrated that the A1298C polymorphism was associated with an increased risk of developing ALL, whereas the C677T polymorphism was associated with a decreased risk (protective factor) in the Latino population.Entities:
Year: 2019 PMID: 31188929 PMCID: PMC6905449 DOI: 10.1590/1678-4685-GMB-2018-0161
Source DB: PubMed Journal: Genet Mol Biol ISSN: 1415-4757 Impact factor: 1.771
Figure 1Flow chart for literature review of studies to be included in the meta-analysis.
Characteristics of included studies.
| Studies (Country) | Age (years) | Type of Cancer | SNP | Group | Genotype | HWE | Control | Score | ||
|---|---|---|---|---|---|---|---|---|---|---|
| 11 | 12 | 22 | ||||||||
| Amorin, 2008 | Cases and controls: | AML | C677T | Controls | 35 | 25 | 2 | 0.32 | PB | 7 |
| (Brazil) | Identified as children | Cases | 24 | 20 | 5 | |||||
| A1298C | Controls | 40 | 16 | 4 | 0.19 | PB | 7 | |||
| Cases | 30 | 14 | 6 | |||||||
|
| Cases: Median age = 27 | AML | C677T | Controls | 65 | 29 | 6 | 0.27 | PB | 6 |
| (Brazil) | (Range: 6-70) | Cases | 17 | 8 | 2 | |||||
| Controls: Median age = 29 | A1298C | Controls | 63 | 32 | 5 | 0.72 | PB | 6 | ||
| (Range 18-40) | Cases | 15 | 11 | 1 | ||||||
| Cases: Median age = 44 | CML | C677T | Controls | 65 | 29 | 6 | 0.27 | PB | 6 | |
| (Range: 9-93) | Cases | 46 | 19 | 2 | ||||||
| Controls: Median age = 29 (Range: 18-40) | A1298C | Controls | 63 | 32 | 5 | 0.72 | PB | 6 | ||
| Cases | 41 | 23 | 3 | |||||||
|
| Cases: Average age = 7.1 ± 5.8 Controls: Average age = 5.4 ± 5.2 | AML | C677T | Controls | 156 | 128 | 31 | 0.53 | PB | 7 |
| (Brazil) | Cases | 93 | 67 | 22 | ||||||
| A1298C | Controls | 190 | 104 | 21 | 0.20 | PB | 7 | |||
| Cases | 104 | 62 | 16 | |||||||
|
| Cases and controls: | ALL | C677T | Controls | 22 | 36 | 13 | 0.80 | HB | 8 |
| (Brazil) | Mean age = 6-7 | Cases | 36 | 28 | 6 | |||||
| (Range: 0.2-15) | A1298C | Controls | 41 | 28 | 2 | 0.27 | HB | 8 | ||
| Cases | 36 | 30 | 5 | |||||||
|
| Cases and controls: | ALL | C677T | Controls | 59 | 79 | 32 | 0.54 | PB | 6 |
| Average age = 40 | ||||||||||
| (Mexico) | Cases | 64 | 78 | 28 | ||||||
| Gutierrez-Alvarez, 2016 | Cases: Average age = 6.9 | ALL | C677T | Controls | 42 | 72 | 38 | 0.52 | N/A | 8 |
| (Range 1-15) | ||||||||||
| (Mexico) | Controls: Average age = 6.7 | Cases | 22 | 36 | 12 | |||||
| A1298C | Controls | 108 | 42 | 2 | 0.35 | N/A | 8 | |||
| Cases | 50 | 14 | 6 | |||||||
|
| Cases: Average age = 57.2 ± 11.4, Controls: Average age = 3.8 ± 2.9 | MM | C677T | Controls | 92 | 79 | 17 | 0.99 | HB | 6 |
| (Brazil) | Cases | 52 | 57 | 14 | ||||||
| A1298C | Controls | 127 | 49 | 12 | 0.02 | HB | 6 | |||
| Cases | 79 | 33 | 11 | |||||||
|
| Cases and controls: | CML | C677T | Controls | 140 | 114 | 19 | 0.52 | PB | 7 |
| Identified as adults (≥20) | ||||||||||
| (Brazil) | Cases | 46 | 47 | 12 | ||||||
| A1298C | Controls | 119 | 143 | 11 | <0.01 * | PB | 7 | |||
| Cases | 61 | 43 | 1 | |||||||
|
| Cases and controls: | ALL | C677T | Controls | 59 | 91 | 27 | 0.40 | PB | 8 |
| (USA) | Identified as children (<15) | Cases | 62 | 72 | 20 | |||||
| A1298C | Controls | 110 | 62 | 6 | 0.44 | PB | 8 | |||
| Cases | 86 | 60 | 8 | |||||||
|
| Cases: Median age =16 | ALL | C677T | Controls | 155 | 384 | 251 | 0.71 | PB | 4* |
| (Mexico) | (Range: 0-40) | Cases | 2 | 10 | 16 | |||||
| Controls: Not provided | ||||||||||
|
| Cases and controls: | ALL | C677T | Controls | 95 | 108 | 21 | 0.22 | PB | 7 |
| (Brazil) | Identified as children (<19). | Cases | 82 | 53 | 9 | |||||
| A1298C | Controls | 147 | 82 | 19 | 0.12 | PB | 7 | |||
| Cases | 55 | 53 | 28 | |||||||
| AML | C677T | Controls | 95 | 108 | 21 | 0.22 | PB | 7 | ||
| Cases | 19 | 12 | 2 | |||||||
| A1298C | Controls | 147 | 82 | 19 | 0.12 | PB | 7 | |||
| Cases | 13 | 13 | 5 | |||||||
|
| Cases: Median age = 4 | AML | C677T | Controls | 123 | 95 | 22 | 0.56 | PB | 8 |
| (Brazil) | (Range: 0-16) | Cases | 21 | 17 | 5 | |||||
| Controls: Median age = 3.5 | ||||||||||
| A1298C | Controls | 151 | 77 | 18 | 0.07 | PB | 8 | |||
| Cases | 28 | 13 | 1 | |||||||
|
| Cases: Average age = 6.2 | ALL | C677T | Controls | 96 | 82 | 20 | 0.69 | PB | 6 |
| (Brazil) | Controls: Average age = 25 | Cases | 96 | 56 | 13 | |||||
| A1298C | Controls | 111 | 76 | 12 | 0.83 | PB | 6 | |||
| Cases | 83 | 74 | 11 | |||||||
11, 12, and 22 indicates the frequency of the wild-type, heterozygote, and homozygote mutant, respectively, where 1 is the C-allele for the C677T polymorphism and A-allele for the A1298C polymorphism, and 2 is the T-allele for the C677T polymorphism and C-allele for the A1298C polymorphism.
Hardy-Weinberg equilibrium (HWE) was calculated using ψ2-test. p-values <0.05 were considered not in agreement with HWE
Source of controls.
Score was calculated using Newcastle–Ottawa Quality Assessment Scale, a score <6 indicates high bias.
Cases and controls have Down syndrome.
Association between the MTHFR polymorphisms and developing hematological cancers in Latin Americans.
| Association | Heterogeneity | ||||||
|---|---|---|---|---|---|---|---|
| Mutation | Genetic Model | OR | 95%CI |
| Effect Model |
| I2 |
|
| |||||||
| Heterozygous | 0.86 | 0.74 – 0.99 | 0.04* | Fixed | 0.31 | 12% | |
| Homozygous | 0.97 | 0.67 – 1.26 | 0.59 | Random | 0.05 | 41% | |
| Dominant | 0.87 | 0.72 – 1.05 | 0.14 | Random | 0.05 | 42% | |
| Recessive | 0.90 | 0.62 – 1.32 | 0.60 | Random | <0.01 | 65% | |
| Allelic | 0.94 | 0.79 – 1.10 | 0.43 | Random | <0.01 | 58% | |
|
| |||||||
| Heterozygous | 1.04 | 0.82 – 1.32 | 0.76 | Random | <0.01 | 55% | |
| Homozygous | 1.69 | 1.11 – 2.56 | 0.01 * | Random | 0.08 | 39% | |
| Dominant | 1.19 | 0.97 – 1.46 | 0.10 | Random | 0.04 | 46% | |
| Recessive | 1.58 | 1.19 – 2.08 | <0.01* | Fixed | 0.16 | 28% | |
| Allelic | 1.21 | 1.00 – 1.46 | 0.05 | Random | <0.01 | 59% | |
Odds ratios (OR) and 95% confidence intervals (95%CI) were calculated by Revman v5.3. p-values <0.05 are considered significant and indicated by *.
Heterogeneity was determined by calculated Cochran’s Q test (p-value) and the Inconsistency Index (I2). Significant heterogeneity was considered when the p-value <0.10 and I2>40%.
Figure 2Begg’s funnel plot for publication bias test. For the MTHFR C677T (A) and A1298C (B) polymorphisms, no detrimental asymmetry was observed (dominant model). Each point represents a separate study. Similar results were determined for all other genetic models.
Association between the MTHFR polymorphisms and developing hematological cancers, stratified by type of cancer.
| Type of cancer | n | Genetic Model | OR | 95% CI |
|
|---|---|---|---|---|---|
|
| |||||
| ALL | 7 | Heterozygous | 0.71 | 0.58 – 0.87 | < 0.01* |
| 7 | Homozygous | 0.62 | 0.46 – 0.85 | < 0.01* | |
| 7 | Dominant | 0.68 | 0.56 – 0.83 | < 0.01* | |
| 7 | Recessive | 0.54 | 0.35 – 0.83 | < 0.01* | |
| 7 | Allelic | 0.75 | 0.65 – 0.87 | <0.01* | |
| AML | 5 | Heterozygous | 0.89 | 0.68 – 1.18 | 0.43 |
| 5 | Homozygous | 1.22 | 0.77 – 1.93 | 0.40 | |
| 5 | Dominant | 0.95 | 0.73 – 1.24 | 0.71 | |
| 5 | Recessive | 1.28 | 0.82 – 1.99 | 0.28 | |
| 5 | Allelic | 1.03 | 0.84 – 1.26 | 0.80 | |
| CML | 2 | Heterozygous | 1.14 | 0.77 – 1.68 | 0.52 |
| 2 | Homozygous | 1.15 | 0.30 – 4.37 | 0.84 | |
| 2 | Dominant | 1.14 | 0.74 – 1.77 | 0.55 | |
| 2 | Recessive | 1.13 | 0.34 – 3.68 | 0.84 | |
| 2 | Allelic | 1.09 | 0.67 – 1.75 | 0.73 | |
| MM | 1 | Heterozygous | 1.28 | 0.79 – 2.07 | 0.32 |
| 1 | Homozygous | 1.46 | 0.66 – 3.19 | 0.35 | |
| 1 | Dominant | 1.31 | 0.83 – 2.07 | 0.25 | |
| 1 | Recessive | 1.29 | 0.61 – 2.73 | 0.50 | |
| 1 | Allelic | 1.23 | 0.87 – 1.73 | 0.24 | |
|
| |||||
| ALL | 5 | Heterozygous | 1.28 | 1.01 – 1.62 | 0.04* |
| 5 | Homozygous | 2.52 | 1.40 – 4.56 | < 0.01* | |
| 5 | Dominant | 1.41 | 1.09 – 1.82 | < 0.01* | |
| 5 | Recessive | 2.25 | 1.48 – 3.41 | < 0.01* | |
| 5 | Allelic | 1.44 | 1.13 – 1.83 | < 0.01* | |
| AML | 5 | Heterozygous | 0.99 | 0.42 – 1.66 | 0.98 |
| 5 | Homozygous | 1.51 | 0.86 – 2.64 | 0.15 | |
| 5 | Dominant | 1.20 | 0.92 – 1.57 | 0.18 | |
| 5 | Recessive | 1.30 | 0.80 – 2.10 | 0.29 | |
| 5 | Allelic | 1.19 | 0.92 – 1.55 | 0.19 | |
| CML | 2 | Heterozygous | 0.77 | 0.42 – 1.42 | 0.40 |
| 2 | Homozygous | 0.47 | 0.09 – 2.42 | 0.37 | |
| 2 | Dominant | 0.75 | 0.39 – 1.42 | 0.37 | |
| 2 | Recessive | 0.49 | 0.16 – 1.52 | 0.21 | |
| 2 | Allelic | 0.78 | 0.48 – 1.27 | 0.31 | |
| MM | 1 | Heterozygous | 1.08 | 0.64 – 1.83 | 0.77 |
| 1 | Homozygous | 1.47 | 0.62 – 3.50 | 0.38 | |
| 1 | Dominant | 1.16 | 0.72 – 1.87 | 0.54 | |
| 1 | Recessive | 1.44 | 0.61 – 3.38 | 0.40 | |
| 1 | Allelic | 1.20 | 0.81 – 1.77 | 0.38 |
Number of studies included in the analysis.
OR and 95%CI were calculated by Revman v5.3. p-values<0.05 are considered significant and indicated by *.