Literature DB >> 31188629

Biological, Medical, and Other Tissue Variables Affecting Biospecimen Utilization.

Dennis Otali1, Sameer Al Diffalha1, William E Grizzle1,2.   

Abstract

Bioresources are critical resources that support biomedical research because of their ability to appropriately collect, process, store, and distribute a wide range of high-quality biospecimens that meet the needs of specific investigators. Of note, some biorepositories are concerned by their growing inventories and their low rates of tissue utilization. This review discusses the technical characteristics of biospecimens that can cause morphological and molecular variability and/or limit the usefulness of biospecimens in research. This article also describes current challenges related to biospecimen characteristics that may affect biospecimen utilization. These include inadequate awareness of investigators about the availability of biospecimens with specific morphologic and molecular features, donor variability, preanalytical variables, technical problems inherent with an investigator's request for biospecimens, limited tissue availability from a biorepository based on requested sizes and/or numbers of available biospecimens, effects of times of warm and cold ischemia, damage of tissues during surgery, and molecular changes during storage. To ensure maximal biospecimen utilization of all types of biospecimens requires continual education of investigators from diverse fields, particularly on factors that cause variability in the morphological and molecular characteristics of tissues. The investigators' requests for biospecimens and associated data should be reviewed carefully, including by a bioresource-associated pathologist. Queries arising from the request/application form should be resolved by bioresource personnel directly with the investigator.

Entities:  

Keywords:  biodistributor; bioresources; biospecimens; donors; preanalytical variables; utilization

Mesh:

Year:  2019        PMID: 31188629      PMCID: PMC6588123          DOI: 10.1089/bio.2018.0094

Source DB:  PubMed          Journal:  Biopreserv Biobank        ISSN: 1947-5543            Impact factor:   2.300


  17 in total

1.  Effects of intra- and post-operative ischemia on the metabolic profile of clinical liver tissue specimens monitored by NMR.

Authors:  Stefano Cacciatore; Xiaoyu Hu; Christian Viertler; Marcel Kap; Gerwin A Bernhardt; Hans-Jörg Mischinger; Peter Riegman; Kurt Zatloukal; Claudio Luchinat; Paola Turano
Journal:  J Proteome Res       Date:  2013-10-29       Impact factor: 4.466

2.  The effects of frozen tissue storage conditions on the integrity of RNA and protein.

Authors:  H Auer; J A Mobley; L W Ayers; J Bowen; R F Chuaqui; L A Johnson; V A Livolsi; I A Lubensky; D McGarvey; L C Monovich; C A Moskaluk; C A Rumpel; K C Sexton; M K Washington; K R Wiles; W E Grizzle; N C Ramirez
Journal:  Biotech Histochem       Date:  2014-05-06       Impact factor: 1.718

3.  Pitfalls in retrospective analyses of biomarkers: a case study with metastatic melanoma patients.

Authors:  Douglas M Potter; Lisa H Butterfield; Sherrie J Divito; Cindy A Sander; John M Kirkwood
Journal:  J Immunol Methods       Date:  2011-12-21       Impact factor: 2.303

4.  Marrow-isolated adult multilineage inducible (MIAMI) cells, a unique population of postnatal young and old human cells with extensive expansion and differentiation potential.

Authors:  Gianluca D'Ippolito; Sylma Diabira; Guy A Howard; Philippe Menei; Bernard A Roos; Paul C Schiller
Journal:  J Cell Sci       Date:  2004-06-01       Impact factor: 5.285

5.  Decreased breast cancer tumor size, stage, and mortality in Rhode Island: an example of a well-screened population.

Authors:  Natalie G Coburn; Maureen A Chung; John Fulton; Blake Cady
Journal:  Cancer Control       Date:  2004 Jul-Aug       Impact factor: 3.302

6.  Marked gene transcript level alterations occur early during radical prostatectomy.

Authors:  Thorsten Schlomm; Esther Näkel; Andreas Lübke; Andreas Buness; Felix K-H Chun; Thomas Steuber; Markus Graefen; Ronald Simon; Guido Sauter; Annemarie Poustka; Hartwig Huland; Andreas Erbersdobler; Holger Sültmann; Olaf J C Hellwinkel
Journal:  Eur Urol       Date:  2007-04-09       Impact factor: 20.096

7.  Variability of protein and phosphoprotein levels in clinical tissue specimens during the preanalytical phase.

Authors:  Sibylle Gündisch; Stefanie Hauck; Hakan Sarioglu; Christina Schott; Christian Viertler; Marcel Kap; Tibor Schuster; Bilge Reischauer; Robert Rosenberg; Cornelis Verhoef; Hans-Joerg Mischinger; Peter Riegman; Kurt Zatloukal; Karl-Friedrich Becker
Journal:  J Proteome Res       Date:  2012-11-16       Impact factor: 4.466

8.  Human genomics. The Genotype-Tissue Expression (GTEx) pilot analysis: multitissue gene regulation in humans.

Authors: 
Journal:  Science       Date:  2015-05-07       Impact factor: 47.728

9.  Isolation of viable human hepatic progenitors from adult livers is possible even after 48 hours of cold ischemia.

Authors:  Sophie Aupet; Gael Simoné; Bruno Heyd; Philippe Bachellier; Isabelle Vidal; Lysiane Richert; Hélène Martin
Journal:  Tissue Eng Part C Methods       Date:  2013-01-15       Impact factor: 3.056

10.  Post-mortem tissue biopsies obtained at minimally invasive autopsy: an RNA-quality analysis.

Authors:  Anita van der Linden; Britt M Blokker; Marcel Kap; Annick C Weustink; Jan L Robertus; Peter H J Riegman; J Wolter Oosterhuis
Journal:  PLoS One       Date:  2014-12-22       Impact factor: 3.240

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  7 in total

1.  Commentary on Improving Biospecimen Utilization by Classic Biobanks: Identifying Past and Minimizing Future Mistakes.

Authors:  William E Grizzle; Katherine C Sexton
Journal:  Biopreserv Biobank       Date:  2018-12-01       Impact factor: 2.300

2.  The Utilization of Biospecimens: Impact of the Choice of Biobanking Model.

Authors:  William E Grizzle; Marianna J Bledsoe; Sameer Al Diffalha; Dennis Otali; Katherine C Sexton
Journal:  Biopreserv Biobank       Date:  2019-06       Impact factor: 2.300

3.  Ensuring Effective Utilization of Biospecimens: Design, Marketing, and Other Important Approaches.

Authors:  Marianna J Bledsoe; Katherine C Sexton
Journal:  Biopreserv Biobank       Date:  2019-06       Impact factor: 2.300

Review 4.  Opportunities and Risks for Research Biobanks in the COVID-19 Era and Beyond.

Authors:  Daniel Simeon-Dubach; Marianne K Henderson
Journal:  Biopreserv Biobank       Date:  2020-10-08       Impact factor: 2.300

5.  The Use of Human Tissues for Research: What Investigators Need to Know.

Authors:  Marianna J Bledsoe; William E Grizzle
Journal:  Altern Lab Anim       Date:  2022-07-08       Impact factor: 2.438

6.  Profiling classical neuropsychiatric biomarkers across biological fluids and following continuous lumbar puncture: A guide to sample type and time.

Authors:  Gallen Triana-Baltzer; Maarten Timmers; Peter De Boer; Manja Schoene; Maura Furey; Cathy Bleys; Isabeau Vrancken; Randy Slemmon; Marc Ceusters; Luc van Nueten; Hartmuth Kolb
Journal:  Compr Psychoneuroendocrinol       Date:  2022-01-15

7.  Issues in the Use of Human Tissues to Support Precision Medicine.

Authors:  William E Grizzle
Journal:  J Health Care Poor Underserved       Date:  2019
  7 in total

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