Literature DB >> 31188596

Are We Opening the Door to a New Era of Medicinal Chemistry or Being Collapsed to a Chemical Singularity?

Yan A Ivanenkov1,2,3,4, Bogdan A Zagribelnyy1,4, Vladimir A Aladinskiy1,3.   

Abstract

The paradigm of "drug-like-ness" dramatically altered the behavior of the medicinal chemistry community for a long time. In recent years, scientists have empirically found a significant increase in key properties of drugs that have moved structures closer to the periphery or the outside of the rule-of-five "cage". Herein, we show that for the past decade, the number of molecules claimed in patent records by major pharmaceutical companies has dramatically decreased, which may lead to a "chemical singularity". New compounds containing fragments with increased 3D complexity are generally larger, slightly more lipophilic, and more polar. A core difference between this study and recently published papers is that we consider the nature and quality of sp3-rich frameworks rather than sp3 count. We introduce the original descriptor MCE-18, which stands for medicinal chemistry evolution, 2018, and this measure can effectively score molecules by novelty in terms of their cumulative sp3 complexity.

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Year:  2019        PMID: 31188596     DOI: 10.1021/acs.jmedchem.9b00004

Source DB:  PubMed          Journal:  J Med Chem        ISSN: 0022-2623            Impact factor:   7.446


  4 in total

1.  LIMO: Latent Inceptionism for Targeted Molecule Generation.

Authors:  Peter Eckmann; Kunyang Sun; Bo Zhao; Mudong Feng; Michael K Gilson; Rose Yu
Journal:  Proc Mach Learn Res       Date:  2022-07

2.  Marine fungal metabolite butyrolactone I prevents cognitive deficits by relieving inflammation and intestinal microbiota imbalance on aluminum trichloride-injured zebrafish.

Authors:  Yingying Nie; Jingming Yang; Longjian Zhou; Zhiyou Yang; Jinyue Liang; Yayue Liu; Xiaoxiang Ma; Zhongji Qian; Pengzhi Hong; Allan V Kalueff; Cai Song; Yi Zhang
Journal:  J Neuroinflammation       Date:  2022-02-07       Impact factor: 8.322

3.  Hizikia fusiforme functional oil (HFFO) prevents neuroinflammation and memory deficits evoked by lipopolysaccharide/aluminum trichloride in zebrafish.

Authors:  Ying-Ying Nie; Long-Jian Zhou; Yan-Mei Li; Wen-Cong Yang; Ya-Yue Liu; Zhi-You Yang; Xiao-Xiang Ma; Yong-Ping Zhang; Peng-Zhi Hong; Yi Zhang
Journal:  Front Aging Neurosci       Date:  2022-09-09       Impact factor: 5.702

4.  DrugSpaceX: a large screenable and synthetically tractable database extending drug space.

Authors:  Tianbiao Yang; Zhaojun Li; Yingjia Chen; Dan Feng; Guangchao Wang; Zunyun Fu; Xiaoyu Ding; Xiaoqin Tan; Jihui Zhao; Xiaomin Luo; Kaixian Chen; Hualiang Jiang; Mingyue Zheng
Journal:  Nucleic Acids Res       Date:  2021-01-08       Impact factor: 16.971

  4 in total

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