| Literature DB >> 31188532 |
Tamorah Lewis1, Prabhakar Chalise2, Cheri Gauldin1, William Truog1.
Abstract
A prospective cohort study was performed in preterm infants less than 32 weeks gestation at birth who were treated with dexamethasone for developing or established bronchopulmonary dysplasia (BPD). Respiratory phenotype (Respiratory Severity Score (RSS)), serum, and urine metabolomics were assessed before and after treatment. Ten infants provided nine matched serum and nine matched urine samples. There was a significant decrease in RSS with steroid treatment. Serum gluconic acid had the largest median fold change (140 times decreased, P = 0.008). In metabolite set enrichment analysis, in both serum and urine, the urea cycle, ammonia recycling, and malate-aspartate shuttle pathways were most significantly enriched when comparing pretreatment and post-treatment (P value < 0.05). In regression analyses, 6 serum and 28 urine metabolites were significantly associated with change in RSS. Urine gluconic acid lactone was the most significantly correlated with clinical response (correlational coefficient 0.915). Pharmacometabolomic discovery of drug response biomarkers in preterm infants may allow precision therapeutics in BPD treatment.Entities:
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Year: 2019 PMID: 31188532 PMCID: PMC6853142 DOI: 10.1111/cts.12659
Source DB: PubMed Journal: Clin Transl Sci ISSN: 1752-8054 Impact factor: 4.689
Demographic and respiratory data
| Infant | GA (weeks) | BW (kg) | Race | DOL steroid | Pre‐RSS | Post‐RSS | Change in RSS | Sample collection | Serum analysis | Urine analysis |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 25 1/7 | 0.480 | WH | 138 | 11.02 | 0.50 (nasal cannula) | −10.52 | 7.3 | x | x |
| 2 | 25 0/7 | 0.420 | AA | 36 | 4.65 | 2.63 | −2.02 | 3.50 | x | x |
| 3 | 23 4/7 | 0.625 | HIS | 26 | 9.75 | 3.87 | −5.88 | 5.33 | x | x |
| 4 | 23 4/7 | 0.595 | HIS | 27 | 8.03 | 2.90 | −5.13 | 4.38 | x | x |
| 5 | 25 2/7 | 0.725 | HIS | 36 | 3.96 | 2.31 | −1.65 | 5.63 | x | x |
| 6 | 24 6/7 | 0.700 | WH | 73 | 4.40 | 2.43 | −1.97 | 6.58 | x | x |
| 7 | 28 6/7 | 1.530 | WH | 26 | 7.80 | 2.99 | −4.81 | 4.42 | x | — |
| 8 | 24 4/7 | 0.370 | AA | 127 | 8.78 | 8.16 | −0.6 | 5.54 | x | x |
| 9 | 25 5/7 | 0.850 | WH | 33 | 5.16 | 2.57 | −2.59 | 6.50 | — | x |
| 10 | 26 4/7 | 0.770 | WH | 111 | 2.34 | 0.50 | −1.84 | 3.50 | x | x |
| Median | 25 0/7 | 0.663 | — | 36 | 6.48 | 2.6 | −2.3 | 5.44 | — | — |
| IQR | 24 2/7–26 0/7 | 0.465–0.790 | — | 27–115 | 4.29–9.02 | 1.86–3.21 | −5.32 to −1.79 | 4.16–6.52 | — | — |
AA, African American; BW, birthweight; DOL steroid, day of life (age) when infant started steroids; GA, gestational age; HIS, Hispanic; IQR, interquartile range; RSS, Respiratory Severity Score; Sample collection, number of days from steroid start to post‐treatment metabolomic sample collection; WH, white.
Figure 1Change in phenotype and example metabolite with dexamethasone therapy. Boxplots displaying (a) change in Respiratory Severity Score and (b) change in trans‐4‐hydroxyproline, an example metabolite that nearly universally decreased with steroid treatment.
Metabolite changes with dexamethasone therapy
| Metabolites | Median (pre) | Median (post) | Fold change | Direction |
|
|---|---|---|---|---|---|
| Serum | |||||
| Oxalic acid | 10,808 | 15,403 | 1.425148 | Up | 0.0039 |
| Lactic acid | 41,371 | 81,823 | 1.977786 | Up | 0.0039 |
| Malic acid | 405 | 837 | 2.066667 | Up | 0.0078 |
| Gluconic acid | 115,513 | 826 | 0.007151 | Down | 0.0078 |
| Caprylic acid | 902 | 4,800 | 5.321508 | Up | 0.0078 |
| Alpha‐ketoglutarate | 669 | 958 | 1.431988 | Up | 0.0117 |
| Saccharic acid | 8,474 | 868 | 0.102431 | Down | 0.0273 |
| Cholesterol | 1,581 | 2,221 | 1.404807 | Up | 0.0273 |
| Arachidic acid | 2,671 | 3,980 | 1.490079 | Up | 0.0273 |
| Fumaric acid | 524 | 1,049 | 2.001908 | Up | 0.038 |
| Stearic acid | 163,353 | 180,749 | 1.106493 | Up | 0.0391 |
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| Urine | |||||
| Uracil | 4,621 | 6,056 | 1.310539 | Up | 0.0039 |
| Kynurenine | 13,311 | 7,034 | 0.528435 | Down | 0.0039 |
| Glucoheptulose | 8,065 | 10,322 | 1.279851 | Up | 0.0039 |
| 1‐Methylinosine | 7,752 | 4,910 | 0.633385 | Down | 0.0039 |
| Pseudo uridine | 1,644,332 | 1,189,538 | 0.723417 | Down | 0.0078 |
| Isohexonic acid | 1,798,781 | 115,773 | 0.064362 | Down | 0.0078 |
| Histidine | 295,790 | 390,974 | 1.321796 | Up | 0.0078 |
| Indole‐3‐lactate | 21,523 | 7,731 | 0.359197 | Down | 0.0117 |
| Sucrose | 7232 | 15,092 | 2.086836 | Up | 0.0195 |
| Nicotinamide | 45,119 | 33,991 | 0.753363 | Down | 0.0195 |
| 7‐Methylguanine | 40,803 | 29,360 | 0.719555 | Down | 0.0195 |
| 5‐Hydroxymethyl‐2‐furoic acid | 53,570 | 28,530 | 0.532574 | Down | 0.0195 |
| Pipecolinic acid | 4,543 | 2,124 | 0.467532 | Down | 0.0273 |
| 1,3,5‐Trimethylcyanuric acid | 64,839 | 50,777 | 0.783124 | Down | 0.0273 |
| 1,2‐Cyclohexanedione | 40,847 | 28,027 | 0.686146 | Down | 0.0391 |
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Bold: Metabolite found significant in both pre–post comparison and regression analysis.
Italics: P value between 0.05 and 0.06, data included to encourage hypothesis generation.
a P value displayed in table is unadjusted for multiple comparisons. bMetabolite also found to differentiate three response groups.
Significant association between the baseline metabolite and change in RSS
| Metabolites | β |
| Correlation |
|---|---|---|---|
| Serum | |||
| Xylitol | −0.00210 | 0.005 | −0.83 |
|
| −0.00036 | 0.013 | −0.78 |
| Cystine | −0.00090 | 0.021 | −0.75 |
| Kynurenic acid | 0.00242 | 0.035 | 0.70 |
| Urine | |||
| Saccharic acid | 0.00000 | 0.001 | −0.89 |
|
| −0.00002 | 0.003 | −0.86 |
| 3,6‐Anhydro‐d‐hexose | −0.00052 | 0.004 | −0.85 |
| Uridine | −0.00066 | 0.015 | −0.77 |
| Gluconic acid lactone | 0.00000 | 0.017 | −0.76 |
| Hexaric acid | −0.00108 | 0.028 | −0.72 |
| Isoribose | −0.00021 | 0.037 | −0.70 |
| Maltotriitol | −0.00042 | 0.038 | −0.69 |
| Citrulline | 0.00011 | 0.039 | 0.69 |
| Beta‐gentiobiose | −0.00003 | 0.043 | −0.68 |
RSS, Respiratory Severity Score.
Change in metabolite levels associated with change in RSS.
Figure 2Metabolite set enrichment analysis.
Figure 3Regression results of change in metabolite with change in Respiratory Severity Score (RSS). The three most strongly correlated metabolites in (a) serum and (b) urine are displayed.
Figure 4Metabolite change by clinical response group. Left panel displays serum results and right panel displays urine results. For the absolute change in Respiratory Severity Score (RSS) in the top row, each bar represents an individual infant change in RSS with steroid treatment. For the change in metabolite, each bar represents the group mean.