Literature DB >> 3118734

Synthesis of fluorescent peptidyl thioneamides and the assay of papain in the presence of trypsin.

K Cho1.   

Abstract

Fluorescent peptidyl thioneamides are synthesized for the first time. The carbonyl oxygen of the scissile amide bond of the substrates was replaced by a sulfur atom. The proteolytic activities of trypsin and papain were measured against 5-(benzyloxycarbonyllysylthioamido)-isophthalic acid dimethyl ester (Z-Lys-psi[CS]-AIE) and 5-(benzyloxycarbonylphenylalanylarginylthioamido)-isophthalic++ + acid dimethyl ester (Z-Phe-Arg-psi[CS]-AIE) and were compared to the corresponding oxyamides. Kinetic constants were measured. With thioneamide substrates, no tryptic hydrolysis was observed. Papain, on the other hand, hydrolyzed both oxy and thioneamides. The Km values of the thioneamides were shown to be slightly lower for papain than for the oxyamides, but the efficiency of the overall catalytic activity was off set by the lower turnover number for the thio derivatives. With the present synthetic substrate technology, selective detection of cysteine proteases in the presence of serine proteases is difficult. The thioneamides reported here were hydrolyzed by papain alone in the presence of trypsin.

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Year:  1987        PMID: 3118734     DOI: 10.1016/0003-2697(87)90393-9

Source DB:  PubMed          Journal:  Anal Biochem        ISSN: 0003-2697            Impact factor:   3.365


  5 in total

1.  Fluorescent Probes for Studying Thioamide Positional Effects on Proteolysis Reveal Insight into Resistance to Cysteine Proteases.

Authors:  Chunxiao Liu; Taylor M Barrett; Xing Chen; John J Ferrie; E James Petersson
Journal:  Chembiochem       Date:  2019-06-14       Impact factor: 3.164

2.  Rosetta Machine Learning Models Accurately Classify Positional Effects of Thioamides on Proteolysis.

Authors:  Sam Giannakoulias; Sumant R Shringari; Chunxiao Liu; Hoang Anh T Phan; Taylor M Barrett; John J Ferrie; E James Petersson
Journal:  J Phys Chem B       Date:  2020-09-01       Impact factor: 2.991

3.  Studies of Thioamide Effects on Serine Protease Activity Enable Two-Site Stabilization of Cancer Imaging Peptides.

Authors:  Taylor M Barrett; Xing S Chen; Chunxiao Liu; Sam Giannakoulias; Hoang Anh T Phan; Jieliang Wang; E Keith Keenan; Richard J Karpowicz; E James Petersson
Journal:  ACS Chem Biol       Date:  2020-03-06       Impact factor: 5.100

4.  Rational design of thioamide peptides as selective inhibitors of cysteine protease cathepsin L.

Authors:  Hoang Anh T Phan; Sam G Giannakoulias; Taylor M Barrett; Chunxiao Liu; E James Petersson
Journal:  Chem Sci       Date:  2021-07-19       Impact factor: 9.825

5.  Thioamide-based fluorescent protease sensors.

Authors:  Jacob M Goldberg; Xing Chen; Nataline Meinhardt; Doron C Greenbaum; E James Petersson
Journal:  J Am Chem Soc       Date:  2014-01-28       Impact factor: 15.419

  5 in total

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