Literature DB >> 31187106

2-Deoxyribose-5-phosphate aldolase, a remarkably tolerant aldolase towards nucleophile substrates.

Domitille Chambre1, Christine Guérard-Hélaine1, Ekaterina Darii2, Aline Mariage2, Jean-Louis Petit2, Marcel Salanoubat2, Véronique de Berardinis2, Marielle Lemaire1, Virgil Hélaine1.   

Abstract

We explored a collection of 2-deoxyribose-5-phosphate aldolases (DERAs) from biodiversity for their nucleophile substrate promiscuity. The DERAs were screened using as nucleophiles propanone, propanal, cyclobutanone, cyclopentanone, dihydroxyacetone, and glycolaldehyde with l-glyceraldehyde-3-phosphate as an electrophile in aldol addition. A DERA from Arthrobacter chlorophenolicus (DERAArthro) efficiently allowed the synthesis of the corresponding aldol adducts in good yields, displaying complementarity in terms of configuration and substrate specificity with fructose-6-phosphate aldolase, the only previously known aldolase with a large nucleophile tolerance.

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Year:  2019        PMID: 31187106     DOI: 10.1039/c9cc03361k

Source DB:  PubMed          Journal:  Chem Commun (Camb)        ISSN: 1359-7345            Impact factor:   6.222


  4 in total

Review 1.  Progress in Stereoselective Construction of C-C Bonds Enabled by Aldolases and Hydroxynitrile Lyases.

Authors:  Mi Liu; Dan Wei; Zexing Wen; Jian-Bo Wang
Journal:  Front Bioeng Biotechnol       Date:  2021-04-21

Review 2.  Current state of and need for enzyme engineering of 2-deoxy-D-ribose 5-phosphate aldolases and its impact.

Authors:  Juha Rouvinen; Martina Andberg; Johan Pääkkönen; Nina Hakulinen; Anu Koivula
Journal:  Appl Microbiol Biotechnol       Date:  2021-08-19       Impact factor: 4.813

3.  Non-natural Aldol Reactions Enable the Design and Construction of Novel One-Carbon Assimilation Pathways in vitro.

Authors:  Yufeng Mao; Qianqian Yuan; Xue Yang; Pi Liu; Ying Cheng; Jiahao Luo; Huanhuan Liu; Yonghong Yao; Hongbing Sun; Tao Cai; Hongwu Ma
Journal:  Front Microbiol       Date:  2021-06-02       Impact factor: 5.640

4.  Substrate specificity of 2-deoxy-D-ribose 5-phosphate aldolase (DERA) assessed by different protein engineering and machine learning methods.

Authors:  Sanni Voutilainen; Markus Heinonen; Martina Andberg; Emmi Jokinen; Hannu Maaheimo; Johan Pääkkönen; Nina Hakulinen; Juha Rouvinen; Harri Lähdesmäki; Samuel Kaski; Juho Rousu; Merja Penttilä; Anu Koivula
Journal:  Appl Microbiol Biotechnol       Date:  2020-11-04       Impact factor: 4.813

  4 in total

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