Literature DB >> 31185073

Role of ploidy in colonization of alpine habitats in natural populations of Arabidopsis arenosa.

Guillaume Wos1, Jana Mořkovská1, Magdalena Bohutínská1,2, Gabriela Šrámková1, Adam Knotek1, Magdalena Lučanová1,2, Stanislav Španiel1,3, Karol Marhold1,3, Filip Kolář1,2,4.   

Abstract

BACKGROUND AND AIMS: Polyploidy is an important driver of plant diversification and adaptation to novel environments. As a consequence of genome doubling, polyploids often exhibit greater colonizing ability or occupy a wider ecological niche than diploids. Although elevation has been traditionally considered as a key driver structuring ploidy variation, we do not know if environmental and phenotypic differentiation among ploidy cytotypes varies along an elevational gradient. Here, we tested for the consequences of genome duplication on genetic diversity, phenotypic variation and habitat preferences on closely related diploid and tetraploid populations that coexist along approx. 2300 m of varying elevation.
METHODS: We sampled and phenotyped 45 natural diploid and tetraploid populations of Arabidopsis arenosa in one mountain range in Central Europe (Western Carpathians) and recorded abiotic and biotic variables at each collection site. We inferred genetic variation, population structure and demographic history in a sub-set of 29 populations genotyped for approx. 36 000 single nucleotide polymorphisms. KEY
RESULTS: We found minor effects of polyploidy on colonization of alpine stands and low genetic differentiation between the two cytotypes, mirroring recent divergence of the polyploids from the local diploid lineage and repeated reticulation events among the cytotypes. This pattern was corroborated by the absence of ecological niche differentiation between the two cytotypes and overall phenotypic similarity at a given elevation.
CONCLUSIONS: The case of A. arenosa contrasts with previous studies that frequently showed clear niche differentiation between cytotypes. Our work stresses the importance of considering genetic structure and past demographic processes when interpreting the patterns of ploidy distributions, especially in species that underwent recent polyploidization events.
© The Author 2019. Published by Oxford University Press on behalf of the Annals of Botany Company. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Entities:  

Keywords:  zzm321990 Arabidopsis arenosazzm321990 ; Alpine adaptation; RAD-sequencing; genetic variation; multivariate statistics; niche differentiation; polyploidy

Mesh:

Year:  2019        PMID: 31185073      PMCID: PMC6758580          DOI: 10.1093/aob/mcz070

Source DB:  PubMed          Journal:  Ann Bot        ISSN: 0305-7364            Impact factor:   4.357


  56 in total

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Authors:  Jeet Sukumaran; Mark T Holder
Journal:  Bioinformatics       Date:  2010-04-25       Impact factor: 6.937

Review 2.  The evolutionary consequences of polyploidy.

Authors:  Sarah P Otto
Journal:  Cell       Date:  2007-11-02       Impact factor: 41.582

3.  The global biogeography of polyploid plants.

Authors:  Anna Rice; Petr Šmarda; Maria Novosolov; Michal Drori; Lior Glick; Niv Sabath; Shai Meiri; Jonathan Belmaker; Itay Mayrose
Journal:  Nat Ecol Evol       Date:  2019-01-29       Impact factor: 15.460

4.  Autopolyploid lineage shows climatic niche expansion but not divergence in Arabidopsis arenosa.

Authors:  Y Franchesco Molina-Henao; Robin Hopkins
Journal:  Am J Bot       Date:  2019-01-04       Impact factor: 3.844

5.  Evidence for shared broad-scale climatic niches of diploid and polyploid plants.

Authors:  K L Glennon; M E Ritchie; K A Segraves
Journal:  Ecol Lett       Date:  2014-05       Impact factor: 9.492

6.  Nonadaptive processes governing early stages of polyploid evolution: Insights from a primary contact zone of relict serpentine Knautia arvensis (Caprifoliaceae).

Authors:  Martin Hanzl; Filip Kolář; Dora Nováková; Jan Suda
Journal:  Am J Bot       Date:  2014-06-11       Impact factor: 3.844

7.  Ecological factors influencing tetraploid speciation in snow buttercups (Ranunculus Adoneus): niche differentiation and tetraploid establishment.

Authors:  Eric J Baack; Maureen L Stanton
Journal:  Evolution       Date:  2005-09       Impact factor: 3.694

8.  Shift in cytotype frequency and niche space in the invasive plant Centaurea maculosa.

Authors:  Urs A Treier; Olivier Broennimann; Signe Normand; Antoine Guisan; Urs Schaffner; Thomas Steinger; Heinz Müller-Schärer
Journal:  Ecology       Date:  2009-05       Impact factor: 5.499

9.  Northern glacial refugia and altitudinal niche divergence shape genome-wide differentiation in the emerging plant model Arabidopsis arenosa.

Authors:  Filip Kolář; Gabriela Fuxová; Eliška Záveská; Atsushi J Nagano; Lucie Hyklová; Magdalena Lučanová; Hiroshi Kudoh; Karol Marhold
Journal:  Mol Ecol       Date:  2016-07-29       Impact factor: 6.185

10.  The rate and potential relevance of new mutations in a colonizing plant lineage.

Authors:  Moises Exposito-Alonso; Claude Becker; Verena J Schuenemann; Ella Reiter; Claudia Setzer; Radka Slovak; Benjamin Brachi; Jörg Hagmann; Dominik G Grimm; Jiahui Chen; Wolfgang Busch; Joy Bergelson; Rob W Ness; Johannes Krause; Hernán A Burbano; Detlef Weigel
Journal:  PLoS Genet       Date:  2018-02-12       Impact factor: 5.917

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  3 in total

1.  Genomic basis of parallel adaptation varies with divergence in Arabidopsis and its relatives.

Authors:  Magdalena Bohutínská; Jakub Vlček; Sivan Yair; Benjamin Laenen; Veronika Konečná; Marco Fracassetti; Tanja Slotte; Filip Kolář
Journal:  Proc Natl Acad Sci U S A       Date:  2021-05-25       Impact factor: 11.205

2.  Transcriptional activity of transposable elements along an elevational gradient in Arabidopsis arenosa.

Authors:  Guillaume Wos; Rimjhim Roy Choudhury; Filip Kolář; Christian Parisod
Journal:  Mob DNA       Date:  2021-02-27

3.  Intricate Distribution Patterns of Six Cytotypes of Allium oleraceum at a Continental Scale: Niche Expansion and Innovation Followed by Niche Contraction With Increasing Ploidy Level.

Authors:  Martin Duchoslav; Michaela Jandová; Lucie Kobrlová; Lenka Šafářová; Jan Brus; Kateřina Vojtěchová
Journal:  Front Plant Sci       Date:  2020-12-09       Impact factor: 5.753

  3 in total

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